Homologs in group_3826
1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product | |
|---|---|---|---|---|---|
| F4V73_RS02875 | F4V73_RS02875 | 34.7 | Morganella psychrotolerans | - | anti-phage dCTP deaminase |
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| P16006 | 4.47e-38 | 131 | 40 | 4 | 174 | 1 | CD | Deoxycytidylate deaminase | Enterobacteria phage T4 |
| P00814 | 4.86e-35 | 123 | 38 | 4 | 173 | 1 | CD | Deoxycytidylate deaminase | Enterobacteria phage T2 |
| P32321 | 5.95e-16 | 73 | 37 | 6 | 125 | 1 | DCTD | Deoxycytidylate deaminase | Homo sapiens |
| Q5M9G0 | 6.9e-16 | 73 | 37 | 6 | 125 | 2 | Dctd | Deoxycytidylate deaminase | Rattus norvegicus |
| Q8K2D6 | 6.9e-16 | 73 | 37 | 6 | 125 | 2 | Dctd | Deoxycytidylate deaminase | Mus musculus |
| Q5RC69 | 7.2e-16 | 73 | 37 | 6 | 125 | 2 | DCTD | Deoxycytidylate deaminase | Pongo abelii |
| O43012 | 5.74e-15 | 73 | 32 | 5 | 152 | 3 | SPBC2G2.13c | Deoxycytidylate deaminase | Schizosaccharomyces pombe (strain 972 / ATCC 24843) |
| P30648 | 1.15e-14 | 70 | 36 | 6 | 135 | 3 | ZK643.2 | Probable deoxycytidylate deaminase | Caenorhabditis elegans |
| P32393 | 1.94e-14 | 70 | 33 | 2 | 124 | 3 | comEB | ComE operon protein 2 | Bacillus subtilis (strain 168) |
| P33968 | 4.76e-14 | 68 | 32 | 4 | 149 | 3 | None | Uncharacterized deaminase in luxG 3'region | Aliivibrio fischeri |
| Q9VWA2 | 6.09e-14 | 68 | 33 | 5 | 126 | 2 | CG6951 | Probable deoxycytidylate deaminase | Drosophila melanogaster |
| P06773 | 1.2e-12 | 67 | 34 | 2 | 121 | 1 | DCD1 | Deoxycytidylate deaminase | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| O22000 | 3.52e-12 | 62 | 33 | 4 | 125 | 3 | 36.1 | Deoxycytidylate deaminase | Mycobacterium phage D29 |
| Q8K9A4 | 4.61e-07 | 49 | 36 | 4 | 83 | 3 | ribD1 | Diaminohydroxyphosphoribosylamino-pyrimidine deaminase | Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) |
| P57533 | 1.79e-06 | 48 | 37 | 4 | 81 | 3 | ribD1 | Diaminohydroxyphosphoribosylamino-pyrimidine deaminase | Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) |
| A9CK16 | 8.75e-06 | 46 | 26 | 6 | 147 | 1 | tadA | tRNA-specific adenosine deaminase | Agrobacterium fabrum (strain C58 / ATCC 33970) |
| P25539 | 7.27e-05 | 45 | 31 | 2 | 102 | 1 | ribD | Riboflavin biosynthesis protein RibD | Escherichia coli (strain K12) |
| P50853 | 8.2e-05 | 44 | 32 | 4 | 107 | 3 | ribD | Riboflavin biosynthesis protein RibD | Actinobacillus pleuropneumoniae |
| O24750 | 0.000105 | 44 | 37 | 1 | 56 | 3 | ribD | Riboflavin biosynthesis protein RibD | Corynebacterium ammoniagenes |
| P17618 | 0.000141 | 43 | 27 | 6 | 129 | 1 | ribD | Riboflavin biosynthesis protein RibD | Bacillus subtilis (strain 168) |
| P70814 | 0.000335 | 43 | 36 | 5 | 84 | 3 | ribD | Riboflavin biosynthesis protein RibD | Bacillus amyloliquefaciens |
| Q8TWU6 | 0.000446 | 42 | 32 | 2 | 68 | 1 | MK0935 | tRNA(cytosine(8)) deaminase | Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) |
| Q89AB0 | 0.000623 | 42 | 35 | 3 | 73 | 3 | ribD | Riboflavin biosynthesis protein RibD | Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) |
| Q5SI38 | 0.001 | 42 | 46 | 0 | 41 | 3 | tilS | tRNA(Ile)-lysidine synthase | Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) |
| Q72IF6 | 0.001 | 42 | 46 | 0 | 41 | 3 | tilS | tRNA(Ile)-lysidine synthase | Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) |
| Source | Morganella psychrotolerans |
|---|---|
| Locus tag | F4V73_RS17810 |
| Feature type | CDS |
| Gene | - |
| Product | deaminase |
| Location | 9529 - 9984 (strand: -1) |
| Length | 456 (nucleotides) / 151 (amino acids) |
| Accession | term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object |
|---|---|
| Length | 103951 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_3826 | |
|---|---|---|
| Orthogroup size | 2 | |
| N. genomes | 1 |
| PF00383 | Cytidine and deoxycytidylate deaminase zinc-binding region |
|---|
| ID | Function(s) descr. | Function(s) cat. | Description |
|---|---|---|---|
| COG2131 | Nucleotide transport and metabolism (F) | F | Deoxycytidylate deaminase |
| KO | Description | Pathways | Modules |
|---|---|---|---|
| K01493 | dCMP deaminase [EC:3.5.4.12] | Pyrimidine metabolism Metabolic pathways Nucleotide metabolism |
- |
MKFKPETLMDMAVLVSRESKCVKYQVGCVIEKDGRIIATGCNGTPAGALNCCDVSASKGWDMSKSADRLKHREWSDVNEIHAEMNAVMTASESVKGANVYVTVEPCNQCAKNLVQAGVKSVTFIQSKSGSGVFMSKHGVSVYGIKTCLLIG
ATGTGTAATCGTGCCGCAGATGCGTGTGAAAGATTGTTAAAGGTGCAGCAATGAAGTTCAAGCCAGAAACTCTGATGGATATGGCGGTACTGGTATCACGCGAATCAAAGTGCGTTAAGTATCAGGTTGGCTGTGTTATCGAGAAAGACGGCAGGATTATCGCCACCGGCTGCAATGGAACGCCAGCCGGTGCGTTAAACTGCTGTGATGTATCAGCGTCGAAAGGCTGGGATATGTCAAAATCAGCAGACCGGCTCAAGCATCGTGAATGGTCGGATGTGAACGAGATCCACGCAGAAATGAACGCCGTCATGACAGCCAGCGAAAGCGTCAAAGGCGCGAACGTTTATGTCACCGTCGAGCCGTGTAACCAGTGTGCGAAAAATCTTGTCCAAGCGGGTGTAAAGTCGGTCACATTTATTCAGTCAAAAAGCGGCAGTGGTGTGTTTATGAGTAAGCATGGCGTTAGTGTATATGGTATAAAAACATGTTTGTTAATTGGTTAATCCGCTAGTATTATTTTTGTGAATTTATAATAACTTTGAGGTAATTATGA
