Homologs in group_184

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07080 FBDBKF_07080 30.4 Morganella morganii S1 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
EHELCC_03890 EHELCC_03890 30.4 Morganella morganii S2 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
NLDBIP_03890 NLDBIP_03890 30.4 Morganella morganii S4 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
LHKJJB_09720 LHKJJB_09720 30.4 Morganella morganii S3 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
HKOGLL_09255 HKOGLL_09255 30.4 Morganella morganii S5 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
F4V73_RS01265 F4V73_RS01265 28.6 Morganella psychrotolerans cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
PMI_RS03410 PMI_RS03410 29.8 Proteus mirabilis HI4320 cydC cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
PMI_RS04485 PMI_RS04485 26.0 Proteus mirabilis HI4320 - AAA family ATPase

Distribution of the homologs in the orthogroup group_184

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_184

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17790
Feature type CDS
Gene -
Product AAA family ATPase
Location 3802 - 6360 (strand: -1)
Length 2559 (nucleotides) / 852 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_184
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF13166 AAA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4694 Translation, ribosomal structure and biogenesis (J) J Wobble nucleotide-excising tRNase

Protein Sequence

MDIKTDICTWLLKQQEWFQVLAENLIAKGSLSVEDINCIVALIKTPEGQSVTKNRTFDGLASPEANDDTLRIIKIDTVRGIENLAPRIPLDFGTGNLTVIYGHNGSGKSSYTRVLKRVSGKPRAAPLKPNVFQPTPPEQSCHITWEINGVSESESWTSNSAAINALKVIDIFDTDEAQHYLTQESTATYIPSVVSFFEKLAQYTKIIREKLSSEQGLLVSQLPMLPDSYRRCIISGNYSALGGVSAENISIMTNWSDVDEQMLKVLNERLSVQDPTEHARQKLALRTSVIQIITKLEQTARAFSVSGIDTIRALRADARTKRIAAQESQKIKDGSLEGVGTSTWRAMWEAARIYSQLPYPDVAFPVTAGASCLLCNQELSAEAQQRLVNFEAFVQSRIEIEANAAEDYYVRALSNLMVSPSTSEIATLCAGAALPDQWKEYLSSIWTLASASRQSLIEHEAIQNAQPIPDLSDAITKLIVYRDKLQGEADQFQKDAAGFDKAKAILDKNEAEARKWVASQKESIEAESVRLRRYDDYDKWIGFTNSRFISLKSTDVTQKVVTDAYAARFNQELRALGAGTIQVELVKIRTENAKVLHQLQLIGVQRDKPHNVLSEGERRIISLAAFLADVSDRPGSAPFIFDDPISSLDHDFEWHVAKRLVELAKSRQVIILTHRLSLFGVIEDLAKKEGDVWKKQHHLSICIESYNGVAGQPADQAAWNANTRSANNILLEKLSKAFQIGEEHGAEAYRGLAQGICSDFRKLIERSVEEDLLNGIVLRHRRGIQTDGRLQHIPSISLEDCKLIESLMTKYSCFEHSQSTEVPIFIPEFSELQADLTCLKEWREQLKKRRTQ

Flanking regions ( +/- flanking 50bp)

TACGGATTGATGCTGACTTTTTTGAACAGTGATCCCAGAGAGTGATAATTATGGATATAAAAACGGATATCTGTACATGGCTGCTTAAACAGCAGGAATGGTTCCAGGTTCTTGCGGAAAATCTTATCGCTAAAGGTAGTTTGTCAGTTGAAGATATCAACTGTATAGTTGCTTTGATTAAAACTCCAGAAGGTCAAAGTGTTACGAAGAATCGAACATTTGATGGACTTGCATCTCCGGAGGCAAATGACGATACTCTCCGGATCATCAAAATTGATACAGTTCGAGGAATCGAAAATCTCGCTCCTCGTATACCTCTTGACTTTGGTACAGGTAATCTCACAGTTATTTATGGCCACAATGGTTCAGGTAAATCTAGTTACACTCGGGTGCTGAAACGTGTATCAGGTAAGCCTCGAGCCGCCCCATTAAAGCCAAATGTCTTTCAGCCGACGCCACCCGAACAAAGTTGTCATATTACGTGGGAAATAAATGGTGTTAGTGAGAGTGAAAGCTGGACATCCAATAGCGCCGCTATCAATGCTCTTAAGGTGATCGATATTTTTGACACTGATGAGGCTCAACATTATCTCACTCAAGAAAGCACCGCTACCTATATTCCAAGTGTAGTGAGTTTTTTTGAAAAATTAGCCCAGTATACAAAAATTATTCGTGAAAAACTTAGCAGCGAGCAGGGATTACTAGTGAGCCAACTTCCTATGCTTCCTGACTCTTATCGGCGCTGTATTATCTCTGGGAATTATAGCGCATTAGGAGGTGTCAGCGCCGAGAATATCTCGATAATGACCAATTGGTCAGATGTCGATGAACAGATGCTGAAAGTACTAAATGAACGACTCAGTGTGCAAGATCCTACTGAACACGCTCGACAAAAATTGGCTCTACGTACCTCTGTTATACAAATCATAACCAAACTGGAACAAACGGCACGTGCGTTTAGTGTATCTGGTATCGATACAATTCGAGCCTTGAGAGCTGATGCAAGGACAAAACGTATTGCCGCACAGGAAAGTCAAAAAATTAAAGATGGTTCTCTTGAGGGGGTTGGTACTTCGACATGGAGAGCTATGTGGGAAGCCGCTCGGATATATTCACAGCTGCCTTATCCCGATGTAGCGTTTCCTGTTACAGCCGGAGCGAGCTGTTTGCTTTGTAATCAGGAACTATCCGCAGAGGCGCAACAAAGGTTAGTAAATTTTGAAGCATTCGTGCAATCCCGTATCGAGATCGAGGCTAACGCGGCAGAAGATTATTATGTGCGTGCACTCAGTAATTTAATGGTTTCTCCTTCCACGTCTGAGATTGCTACTCTTTGCGCTGGTGCTGCCCTCCCTGACCAGTGGAAGGAGTACTTGTCAAGTATATGGACCTTAGCATCAGCTTCTCGTCAATCATTAATTGAACACGAAGCGATTCAGAATGCGCAACCAATACCTGATTTGAGTGATGCGATAACAAAATTAATTGTATATCGCGATAAACTTCAGGGTGAAGCTGACCAATTTCAAAAGGATGCTGCTGGATTTGACAAAGCTAAAGCGATACTGGACAAAAATGAAGCAGAGGCTCGTAAGTGGGTCGCTAGTCAAAAAGAATCAATTGAGGCTGAATCAGTTAGGCTTAGAAGATATGACGACTACGATAAATGGATAGGATTTACCAATTCCCGTTTTATTTCATTAAAATCTACTGATGTAACTCAAAAAGTAGTAACGGACGCCTATGCCGCGAGGTTTAATCAGGAATTGAGAGCGCTAGGAGCCGGCACTATTCAGGTTGAGCTTGTGAAAATCAGGACTGAAAATGCGAAGGTTTTACACCAGCTACAATTGATTGGCGTTCAGAGAGATAAGCCGCATAACGTTCTTAGTGAGGGGGAAAGGCGAATTATTTCGTTAGCGGCATTCTTAGCTGACGTAAGTGATAGGCCAGGATCTGCTCCATTTATTTTTGATGACCCTATTTCTTCACTGGATCATGATTTTGAGTGGCATGTTGCGAAGAGATTGGTGGAGCTTGCAAAATCTCGTCAGGTTATTATTTTGACACACAGATTGTCTCTTTTTGGTGTAATAGAGGATTTGGCTAAAAAAGAAGGCGATGTGTGGAAAAAACAGCATCATCTCTCTATATGTATCGAATCTTACAACGGTGTCGCCGGCCAACCAGCTGATCAGGCTGCTTGGAACGCAAATACTAGATCAGCTAATAATATTCTTCTAGAAAAATTGAGTAAGGCTTTCCAGATTGGTGAAGAACATGGAGCAGAAGCATATCGTGGGCTAGCTCAAGGCATTTGTAGTGATTTTCGAAAACTTATTGAACGCTCTGTTGAAGAGGACTTACTTAATGGGATTGTTTTACGGCACCGCCGAGGCATTCAAACAGATGGGAGGCTTCAGCATATACCAAGTATTTCTTTAGAGGATTGTAAATTAATCGAAAGTCTGATGACTAAATACAGTTGTTTCGAACACAGTCAATCAACCGAAGTGCCTATTTTCATCCCTGAATTTTCAGAGTTGCAAGCTGACCTCACTTGTTTAAAGGAATGGCGCGAGCAACTTAAAAAGCGGCGGACACAATAGAAATATAGTGACTAAAACCACCTCAGCGTTGACGTTTTCTATAAGTGCGA