Homologs in group_2058

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15425 FBDBKF_15425 83.9 Morganella morganii S1 ravA ATPase RavA
EHELCC_15785 EHELCC_15785 83.9 Morganella morganii S2 ravA ATPase RavA
NLDBIP_16585 NLDBIP_16585 83.9 Morganella morganii S4 ravA ATPase RavA
LHKJJB_16220 LHKJJB_16220 83.9 Morganella morganii S3 ravA ATPase RavA
HKOGLL_15990 HKOGLL_15990 83.9 Morganella morganii S5 ravA ATPase RavA
PMI_RS15105 PMI_RS15105 60.6 Proteus mirabilis HI4320 ravA ATPase RavA

Distribution of the homologs in the orthogroup group_2058

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2058

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7NA81 0.0 603 58 1 497 3 ravA ATPase RavA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
C6DJF8 0.0 583 60 5 502 3 ravA ATPase RavA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
B1JR27 0.0 580 61 2 488 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66GH6 0.0 580 61 2 488 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TSH9 0.0 580 61 2 488 3 ravA ATPase RavA Yersinia pestis (strain Pestoides F)
Q1CNU2 0.0 580 61 2 488 3 ravA ATPase RavA Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZJT1 0.0 580 61 2 488 3 ravA ATPase RavA Yersinia pestis
B2K7I7 0.0 580 61 2 488 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FCN1 0.0 580 61 2 488 3 ravA ATPase RavA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A1JHR5 0.0 578 59 1 500 3 ravA ATPase RavA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A9QYG5 0.0 578 61 2 488 3 ravA ATPase RavA Yersinia pestis bv. Antiqua (strain Angola)
Q6DB93 0.0 577 59 4 501 3 ravA ATPase RavA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q0TAW3 0.0 557 57 2 492 3 ravA ATPase RavA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N2I5 0.0 557 57 2 492 3 ravA ATPase RavA Escherichia coli O81 (strain ED1a)
B7UML1 0.0 556 57 2 492 3 ravA ATPase RavA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B7NF62 0.0 556 58 2 492 3 ravA ATPase RavA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q1R4I6 0.0 556 57 2 492 3 ravA ATPase RavA Escherichia coli (strain UTI89 / UPEC)
A1AHS6 0.0 556 57 2 492 3 ravA ATPase RavA Escherichia coli O1:K1 / APEC
B7MGG6 0.0 556 57 2 492 3 ravA ATPase RavA Escherichia coli O45:K1 (strain S88 / ExPEC)
B1LL73 0.0 555 57 2 492 3 ravA ATPase RavA Escherichia coli (strain SMS-3-5 / SECEC)
Q8FBS5 0.0 555 57 2 492 3 ravA ATPase RavA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7NR48 0.0 554 57 2 492 3 ravA ATPase RavA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YY04 0.0 554 57 2 492 3 ravA ATPase RavA Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAX4 0.0 554 57 2 492 3 ravA ATPase RavA Escherichia coli O157:H7
Q0SYT0 0.0 554 57 2 492 3 ravA ATPase RavA Shigella flexneri serotype 5b (strain 8401)
Q31UP5 0.0 554 57 2 492 3 ravA ATPase RavA Shigella boydii serotype 4 (strain Sb227)
P31473 0.0 553 57 2 492 1 ravA ATPase RavA Escherichia coli (strain K12)
C4ZZ24 0.0 553 57 2 492 3 ravA ATPase RavA Escherichia coli (strain K12 / MC4100 / BW2952)
Q329T5 0.0 553 57 2 491 3 ravA ATPase RavA Shigella dysenteriae serotype 1 (strain Sd197)
B4TN47 0.0 553 58 3 492 3 ravA ATPase RavA Salmonella schwarzengrund (strain CVM19633)
B1IWZ2 0.0 553 57 2 492 3 ravA ATPase RavA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q3YVQ0 0.0 553 57 2 492 3 ravA ATPase RavA Shigella sonnei (strain Ss046)
Q83PJ3 0.0 553 57 2 492 3 ravA ATPase RavA Shigella flexneri
Q1CC48 0.0 552 61 2 465 3 ravA ATPase RavA Yersinia pestis bv. Antiqua (strain Antiqua)
B7M5A2 0.0 552 57 2 492 3 ravA ATPase RavA Escherichia coli O8 (strain IAI1)
B7L896 0.0 552 57 2 492 3 ravA ATPase RavA Escherichia coli (strain 55989 / EAEC)
A7ZTV7 0.0 552 57 2 492 3 ravA ATPase RavA Escherichia coli O139:H28 (strain E24377A / ETEC)
A9MXC3 0.0 552 57 3 492 3 ravA ATPase RavA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4TAY8 0.0 551 57 3 492 3 ravA ATPase RavA Salmonella heidelberg (strain SL476)
B5QVE6 0.0 551 57 3 492 3 ravA ATPase RavA Salmonella enteritidis PT4 (strain P125109)
B5FN49 0.0 551 57 3 492 3 ravA ATPase RavA Salmonella dublin (strain CT_02021853)
Q57HW4 0.0 551 57 3 492 3 ravA ATPase RavA Salmonella choleraesuis (strain SC-B67)
Q8ZKW2 0.0 551 57 2 492 3 ravA ATPase RavA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5BIQ0 0.0 550 57 2 492 3 ravA ATPase RavA Salmonella paratyphi A (strain AKU_12601)
Q5PJX8 0.0 550 57 2 492 3 ravA ATPase RavA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4SYE7 0.0 550 57 2 492 3 ravA ATPase RavA Salmonella newport (strain SL254)
B5RFU9 0.0 550 57 3 492 3 ravA ATPase RavA Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q8Z2R1 0.0 548 57 3 492 3 ravA ATPase RavA Salmonella typhi
Q60389 6.23e-50 178 35 8 306 4 MJ0079 Uncharacterized protein MJ0079 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58222 3.21e-46 168 36 5 276 4 MJ0812 Uncharacterized protein MJ0812 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q3V4Q1 1.9e-14 79 31 2 161 4 None Structural protein ORF618 Acidianus two-tailed virus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17720
Feature type CDS
Gene ravA
Product ATPase RavA
Location 185489 - 187000 (strand: -1)
Length 1512 (nucleotides) / 503 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2058
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12592 ATPase, RavA, C-terminal
PF17868 AAA lid domain
PF20030 MoxR domain in the MoxR-vWA-beta-propeller ternary systems
PF20265 ATPase, RavA, LARA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0714 General function prediction only (R) R MoxR-like ATPase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03924 MoxR-like ATPase [EC:3.6.3.-] - -

Protein Sequence

MQRSERIALLSRHLETGLYERQHAIRLCLLATLSGESVFLLGPPGIAKSMIARRMKQIFSHARAFEYLMTRFSTPEEIFGPLSIQALKDEGKYQRITQGYLPDAEIVFLDEIWKAGPAILNTLLTAINERKYRNGNSEDTIPMRLLVAASNELPDDDSSLEALYDRMLIRLWLDKLQEKQNFRAMLSNTQRVPEEVIPAHLQVTDEEYHQWQTEIDNIVLTDQIFELIYQLRRDIERLDNAPYISDRRWKKALRLLQASAFFNGHSSITPLDLILLKDCLWHDMTSLKSIPQLLTQLMSEQAYQQRSLLLKLEKHYQEWLLATQTQQLQEAFCVIRNSGRFARKASYALPDNQPPGALTLFLHTPLTLHDITVTHVIIERSAFYTFFEKGEHIAVKFNGIGFTQSVSAVINDNGQLILRDVSLRSSTLFPAGENHQMTDIQRQTWLDTLSPIRQSLVQQRQLFAQHQPALFISHEWIALIEESFLPVTERLEQLTHQISGNQC

Flanking regions ( +/- flanking 50bp)

TTTTAGTTTATAAAGACAGGAACTGCATCAGTAAATTCACGGGGATCGCCATGCAACGTTCAGAACGCATTGCACTGTTAAGCCGCCATCTGGAAACCGGCCTGTATGAACGCCAGCACGCCATCCGGCTCTGTTTATTAGCCACACTCAGCGGTGAGAGTGTTTTTTTGCTCGGTCCGCCGGGAATAGCCAAAAGTATGATTGCGCGGCGGATGAAACAAATATTCAGTCATGCCCGCGCATTTGAATATCTGATGACCCGCTTTTCTACCCCGGAAGAGATTTTCGGTCCCCTTTCTATTCAGGCACTGAAAGATGAAGGGAAATATCAGCGCATCACACAAGGCTATCTGCCGGATGCGGAAATCGTTTTTCTTGATGAGATCTGGAAAGCCGGCCCGGCGATCCTCAATACACTGCTGACTGCGATTAATGAACGGAAATACCGCAATGGTAACAGTGAAGACACTATTCCCATGCGCTTGCTGGTGGCCGCGTCGAATGAACTGCCGGACGATGACAGCAGCCTGGAAGCCCTTTATGACCGGATGCTTATCCGGCTGTGGCTCGATAAGTTGCAGGAAAAACAAAATTTCCGTGCCATGCTGAGCAATACTCAGCGCGTACCCGAAGAGGTAATACCTGCTCATTTACAGGTTACGGATGAGGAATACCATCAGTGGCAGACTGAGATTGACAACATTGTGCTGACCGATCAGATATTCGAGCTTATTTACCAGTTACGCCGGGATATTGAGCGGCTGGATAACGCGCCCTATATTTCTGATCGCCGCTGGAAAAAAGCCCTGCGATTATTACAGGCCAGTGCCTTTTTTAACGGGCACAGCAGTATCACACCCTTAGATCTGATCCTGCTGAAAGATTGCCTCTGGCATGATATGACCTCACTGAAATCTATTCCGCAACTACTGACACAACTGATGAGCGAACAGGCTTACCAGCAGCGCAGCCTGCTGCTGAAACTGGAAAAACACTATCAGGAATGGCTTCTGGCGACACAAACACAACAGCTTCAGGAAGCATTCTGTGTCATCCGCAATTCAGGGCGCTTCGCGCGCAAAGCCAGTTATGCGTTACCGGATAACCAGCCGCCCGGTGCACTGACACTCTTTCTGCATACACCTCTCACATTACATGACATTACCGTTACGCATGTGATTATTGAGCGCAGTGCTTTTTATACCTTTTTTGAAAAAGGTGAGCACATCGCGGTGAAATTCAACGGGATCGGATTTACCCAGTCCGTTTCTGCCGTGATTAATGATAACGGACAGTTAATACTGCGCGATGTCAGTCTGCGCAGTTCCACACTGTTTCCAGCCGGAGAAAACCATCAGATGACGGATATTCAGAGACAAACCTGGCTCGATACTCTGTCACCCATCCGTCAGTCACTGGTACAACAGCGCCAGTTATTCGCACAGCATCAACCGGCACTGTTTATCAGCCATGAATGGATAGCCCTGATTGAAGAGAGCTTTCTGCCGGTTACAGAACGCCTGGAACAACTGACACACCAGATAAGCGGTAACCAGTGTTAAGTCTCTCGGCATTAGACCTGGCACTGGCAGTCAATGAAGGGGAGCTTATT