Homologs in group_2147

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16135 FBDBKF_16135 93.5 Morganella morganii S1 fdhE formate dehydrogenase accessory protein FdhE
EHELCC_16170 EHELCC_16170 93.5 Morganella morganii S2 fdhE formate dehydrogenase accessory protein FdhE
NLDBIP_17170 NLDBIP_17170 93.5 Morganella morganii S4 fdhE formate dehydrogenase accessory protein FdhE
LHKJJB_17090 LHKJJB_17090 93.5 Morganella morganii S3 fdhE formate dehydrogenase accessory protein FdhE
HKOGLL_16750 HKOGLL_16750 93.5 Morganella morganii S5 fdhE formate dehydrogenase accessory protein FdhE
PMI_RS15380 PMI_RS15380 75.2 Proteus mirabilis HI4320 fdhE formate dehydrogenase accessory protein FdhE

Distribution of the homologs in the orthogroup group_2147

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2147

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4F0S1 1.13e-169 475 74 2 308 3 fdhE Protein FdhE homolog Proteus mirabilis (strain HI4320)
Q7MY03 3.49e-165 464 70 1 309 3 fdhE Protein FdhE homolog Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B1JH25 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q663U4 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TGQ2 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pestis (strain Pestoides F)
Q1CDA1 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pestis bv. Antiqua (strain Nepal516)
A9R4E5 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pestis bv. Antiqua (strain Angola)
Q8Z9Y0 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pestis
B2K7H7 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C3I0 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pestis bv. Antiqua (strain Antiqua)
A7FP81 2.28e-152 432 67 1 309 3 fdhE Protein FdhE homolog Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A1JT26 1.85e-151 429 67 3 311 3 fdhE Protein FdhE homolog Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A6TG82 2.42e-150 426 66 2 309 3 fdhE Protein FdhE homolog Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XZH9 2.42e-150 426 66 2 309 3 fdhE Protein FdhE homolog Klebsiella pneumoniae (strain 342)
A8AL48 5.68e-150 426 65 2 309 3 fdhE Protein FdhE homolog Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8ZKT0 9.61e-150 425 66 2 309 3 fdhE Protein FdhE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TPP6 9.61e-150 425 66 2 309 3 fdhE Protein FdhE Salmonella schwarzengrund (strain CVM19633)
C0Q3K0 9.61e-150 425 66 2 309 3 fdhE Protein FdhE Salmonella paratyphi C (strain RKS4594)
A9MZB0 9.61e-150 425 66 2 309 3 fdhE Protein FdhE Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4SZX8 9.61e-150 425 66 2 309 3 fdhE Protein FdhE Salmonella newport (strain SL254)
B4TBW8 9.61e-150 425 66 2 309 3 fdhE Protein FdhE Salmonella heidelberg (strain SL476)
B5F008 9.61e-150 425 66 2 309 3 fdhE Protein FdhE Salmonella agona (strain SL483)
A9MI98 1.33e-149 424 66 2 309 3 fdhE Protein FdhE Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q8Z2U4 1.77e-149 424 66 2 309 3 fdhE Protein FdhE Salmonella typhi
Q57HI2 6.67e-149 423 65 2 309 3 fdhE Protein FdhE Salmonella choleraesuis (strain SC-B67)
B5BJF4 2.68e-148 421 65 2 309 3 fdhE Protein FdhE Salmonella paratyphi A (strain AKU_12601)
Q5PKF1 2.68e-148 421 65 2 309 3 fdhE Protein FdhE Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5RFD8 7.83e-148 420 65 2 309 3 fdhE Protein FdhE Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QWW9 7.83e-148 420 65 2 309 3 fdhE Protein FdhE Salmonella enteritidis PT4 (strain P125109)
A7ML45 8.93e-148 420 65 2 309 3 fdhE Protein FdhE homolog Cronobacter sakazakii (strain ATCC BAA-894)
B5FP25 5.03e-147 418 65 2 309 3 fdhE Protein FdhE Salmonella dublin (strain CT_02021853)
A4WGB3 6.33e-147 418 65 2 309 3 fdhE Protein FdhE homolog Enterobacter sp. (strain 638)
B1IVI7 8.66e-146 415 64 2 309 3 fdhE Protein FdhE Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6Z4 8.66e-146 415 64 2 309 3 fdhE Protein FdhE Escherichia coli O9:H4 (strain HS)
A8G7V7 1.74e-145 414 66 1 308 3 fdhE Protein FdhE homolog Serratia proteamaculans (strain 568)
Q3YV85 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Shigella sonnei (strain Ss046)
Q83PE8 3.08e-145 414 64 2 309 3 fdhE Protein FdhE homolog Shigella flexneri
Q0SZ81 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Shigella flexneri serotype 5b (strain 8401)
Q32A61 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Shigella dysenteriae serotype 1 (strain Sd197)
B7LVF7 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B6I4N1 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia coli (strain SE11)
B7M693 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia coli O8 (strain IAI1)
B5YZ28 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X8B9 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia coli O157:H7
B7L9E7 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia coli (strain 55989 / EAEC)
A7ZUA1 3.08e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia coli O139:H28 (strain E24377A / ETEC)
B1LMS6 3.36e-145 414 64 2 309 3 fdhE Protein FdhE Escherichia coli (strain SMS-3-5 / SECEC)
Q31UA2 8.52e-145 412 64 2 309 3 fdhE Protein FdhE Shigella boydii serotype 4 (strain Sb227)
B2TVN6 8.52e-145 412 64 2 309 3 fdhE Protein FdhE Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
P13024 9.94e-145 412 64 2 309 1 fdhE Protein FdhE Escherichia coli (strain K12)
B1XB59 9.94e-145 412 64 2 309 3 fdhE Protein FdhE Escherichia coli (strain K12 / DH10B)
C5A059 9.94e-145 412 64 2 309 3 fdhE Protein FdhE Escherichia coli (strain K12 / MC4100 / BW2952)
Q1R424 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli (strain UTI89 / UPEC)
B7NFJ2 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q8FBE8 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAG8 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AI70 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli O1:K1 / APEC
B7MQY5 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli O81 (strain ED1a)
B7NUB8 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7MI25 1.2e-144 412 64 2 309 3 fdhE Protein FdhE Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UNL0 6.52e-144 410 64 2 309 3 fdhE Protein FdhE Escherichia coli O127:H6 (strain E2348/69 / EPEC)
C6DA17 9.96e-137 392 61 2 306 3 fdhE Protein FdhE homolog Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D2U2 4.31e-136 390 60 2 306 3 fdhE Protein FdhE homolog Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C5BB03 2.16e-134 386 59 2 309 3 fdhE Protein FdhE homolog Edwardsiella ictaluri (strain 93-146)
B2VCF8 3.3e-123 357 58 4 309 3 fdhE Protein FdhE homolog Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
B8F4R6 1.69e-109 323 51 2 310 3 fdhE Protein FdhE homolog Glaesserella parasuis serovar 5 (strain SH0165)
P44452 2.46e-106 315 51 2 308 3 fdhE Protein FdhE homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A5UBC8 1.21e-105 313 50 2 308 3 fdhE Protein FdhE homolog Haemophilus influenzae (strain PittEE)
Q4QPN5 1.47e-105 313 50 2 308 3 fdhE Protein FdhE homolog Haemophilus influenzae (strain 86-028NP)
A5UFI3 4.06e-105 311 50 2 308 3 fdhE Protein FdhE homolog Haemophilus influenzae (strain PittGG)
B0BPI1 4.84e-104 309 50 3 307 3 fdhE Protein FdhE homolog Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
B3GXP2 4.84e-104 309 50 3 307 3 fdhE Protein FdhE homolog Actinobacillus pleuropneumoniae serotype 7 (strain AP76)
A3N0Q6 4.84e-104 309 50 3 307 3 fdhE Protein FdhE homolog Actinobacillus pleuropneumoniae serotype 5b (strain L20)
Q9CNM2 3.53e-103 307 50 2 310 3 fdhE Protein FdhE homolog Pasteurella multocida (strain Pm70)
A6VNS4 3.95e-102 304 49 3 308 3 fdhE Protein FdhE homolog Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
Q7VM84 2.11e-99 297 49 3 307 3 fdhE Protein FdhE homolog Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q0K181 1.22e-57 190 39 6 298 3 fdhE Protein FdhE homolog Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P59188 6.24e-54 181 36 1 276 3 fdhE Protein FdhE homolog Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
B8E3M2 2.35e-53 179 36 1 274 3 fdhE Protein FdhE homolog Shewanella baltica (strain OS223)
A6WHI5 8.33e-53 178 36 1 276 3 fdhE Protein FdhE homolog Shewanella baltica (strain OS185)
Q0I0J9 1.89e-52 177 36 1 276 3 fdhE Protein FdhE homolog Shewanella sp. (strain MR-7)
Q0HP31 1.89e-52 177 36 1 276 3 fdhE Protein FdhE homolog Shewanella sp. (strain MR-4)
A9KV86 6.96e-52 175 36 1 274 3 fdhE Protein FdhE homolog Shewanella baltica (strain OS195)
Q9HV00 5.75e-51 173 36 5 293 1 fdhE Protein FdhE homolog Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q88QJ9 2.34e-42 151 33 7 308 3 fdhE Protein FdhE homolog Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
A4VFW9 1.12e-34 130 32 6 287 3 fdhE Protein FdhE homolog Stutzerimonas stutzeri (strain A1501)
Q931D7 1.38e-34 130 30 6 295 3 fdhE Protein FdhE homolog Rhizobium meliloti (strain 1021)
O67150 1.63e-16 81 27 7 195 3 fdhE Protein FdhE homolog Aquifex aeolicus (strain VF5)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17480
Feature type CDS
Gene fdhE
Product formate dehydrogenase accessory protein FdhE
Location 127825 - 128751 (strand: -1)
Length 927 (nucleotides) / 308 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2147
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04216 Protein involved in formate dehydrogenase formation

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3058 Energy production and conversion (C)
Posttranslational modification, protein turnover, chaperones (O)		 CO Formate dehydrogenase maturation protein FdhE

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02380 FdhE protein - -

Protein Sequence

MSIRIVSKEELGQAQKSEKGIGFIPAVLFPNLKNLYQRRAERFDQLAKDNPFADYLEFAAEITRAQQKALYDNPLEMDMDALMATNKPGKALLDCRTFERTAHWRKLLKSIIAELLPVAPEHTRPTLENLEKASENELEDMATALFNQTFSAVSPDKSVFIWAALSLYWAQMATAIPGKGREEYGEHRQFCPVCAAMPVSGVIQIGSTQGLRYLHCGLCETEWHVVRIKCTNCEQTRDLNYWSLDSEQAAVKAESCGDCGSYLKILSQEKDVNVDAVADDLATLVLDARMEEEDFARSSINPFLFPNE

Flanking regions ( +/- flanking 50bp)

TTATTTGCCGGACCGGCTTATCCTCTCCATTTAGAAGAAGAGCAATTATAATGAGTATCCGAATTGTATCCAAAGAAGAGCTGGGACAGGCTCAGAAAAGTGAAAAAGGGATTGGCTTTATCCCCGCAGTTTTATTTCCTAATCTGAAAAATTTATATCAGCGCCGTGCTGAGCGTTTTGATCAACTGGCAAAAGATAATCCGTTTGCAGATTACCTTGAATTTGCGGCAGAAATTACCCGTGCACAGCAAAAAGCGTTGTATGACAATCCGCTTGAAATGGATATGGACGCGCTGATGGCAACGAATAAACCGGGCAAAGCACTGCTCGATTGCCGTACTTTTGAGCGCACCGCACACTGGCGTAAACTGCTGAAAAGCATTATTGCCGAGCTTTTGCCGGTTGCTCCGGAGCACACCCGCCCGACCCTGGAAAATCTGGAAAAAGCCTCTGAAAATGAGCTGGAAGATATGGCAACCGCGCTGTTTAATCAGACATTTTCTGCGGTATCGCCGGATAAATCTGTGTTTATCTGGGCGGCGTTATCTCTTTACTGGGCACAAATGGCGACCGCTATTCCGGGTAAAGGCCGTGAAGAGTACGGCGAGCACCGCCAGTTCTGTCCTGTCTGTGCCGCGATGCCGGTTTCCGGGGTTATCCAGATAGGCTCTACCCAGGGATTACGCTATCTGCACTGCGGATTATGTGAGACTGAGTGGCATGTGGTCCGTATCAAGTGTACAAATTGTGAACAGACCCGTGATCTGAACTACTGGTCACTGGACAGTGAACAGGCCGCTGTGAAAGCAGAAAGCTGCGGTGACTGCGGCAGCTACCTGAAAATTCTGTCTCAGGAAAAAGATGTCAATGTTGATGCGGTAGCAGATGACCTGGCAACCCTGGTTCTGGATGCCCGTATGGAAGAAGAAGACTTTGCCCGCAGCAGTATCAACCCGTTCCTGTTCCCGAACGAATAAATCAGTCCGTCATTATCACGAAGTGAGCCCGCTATGAATGAACGTGCGTT