Homologs in group_4187

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4187

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4187

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23840 5.74e-158 443 75 0 274 4 dinD DNA damage-inducible protein D Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17395
Feature type CDS
Gene dinD
Product DNA damage-inducible protein D
Location 109309 - 110133 (strand: 1)
Length 825 (nucleotides) / 274 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4187
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF02498 BRO family, N-terminal domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K14623 DNA-damage-inducible protein D - -

Protein Sequence

MDRHHQPFEEIKKIDESGIEFWSARELSKLLEYSEYRHFTPVLDRAKEACLHSGHNIEDHFEDVLDMVNIGSGAQRKLKDVILSRYACYLVVQNGDPSKPVIAAGQTYFALQTRRQELSDNKEFKRLKEDEKRLFLRNELKEHNKLLVETAQQAGVETGIDFAVFQNHGYKGLYGGLDHKGIHRRKGLKDSQRILDHMGSTELAANLFRATQAEEKLRRDNVKNKTIANQTHFEVGRKVRDTIHELGGTMPEDLPSPEKSIKQLESAVKKVLKK

Flanking regions ( +/- flanking 50bp)

ATATTTTCCAGCCAGATTCCGACATAGAAACCAACACGCGAGGTTGATACATGGATCGTCACCACCAGCCCTTCGAAGAAATAAAGAAAATTGATGAGTCAGGTATCGAATTTTGGTCTGCACGAGAACTATCAAAGCTTCTCGAGTACTCTGAGTATCGTCATTTCACGCCAGTATTAGACCGCGCTAAAGAGGCTTGTTTGCATAGCGGTCATAATATTGAAGACCATTTCGAGGATGTCCTCGATATGGTCAATATTGGTTCGGGTGCTCAAAGAAAGCTTAAGGATGTAATACTATCTCGTTATGCTTGTTATCTCGTTGTGCAGAATGGCGATCCAAGTAAGCCGGTTATTGCTGCCGGGCAAACATATTTTGCTCTTCAGACCAGGCGACAAGAGCTATCTGATAATAAAGAATTCAAGCGTCTGAAAGAAGATGAAAAGCGCCTATTCCTGCGCAATGAATTGAAAGAACACAATAAATTATTAGTTGAAACCGCCCAGCAAGCAGGTGTGGAAACCGGCATTGATTTTGCTGTCTTTCAGAACCACGGGTACAAGGGACTGTACGGTGGCTTGGATCATAAAGGAATACATCGGCGTAAGGGACTAAAAGACTCACAGCGGATTTTAGACCATATGGGTTCAACCGAATTAGCAGCCAATCTGTTTAGAGCAACACAGGCAGAAGAAAAATTAAGACGGGATAACGTAAAAAATAAAACAATCGCAAACCAAACTCATTTCGAGGTTGGCAGAAAAGTAAGGGACACGATTCATGAGTTGGGCGGAACCATGCCCGAGGATCTTCCTTCCCCGGAAAAGAGCATTAAGCAGTTAGAATCAGCAGTGAAGAAAGTCCTCAAAAAATAAATTCAACATCGGGTAACACTTCACAGTAACTCAAAACAAATACCGGGCCG