Homologs in group_3473

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16375 FBDBKF_16375 44.2 Morganella morganii S1 - Glycosyltransferase
EHELCC_16410 EHELCC_16410 44.2 Morganella morganii S2 - Glycosyltransferase
NLDBIP_19895 NLDBIP_19895 44.2 Morganella morganii S4 - Glycosyltransferase
LHKJJB_16850 LHKJJB_16850 44.2 Morganella morganii S3 - Glycosyltransferase

Distribution of the homologs in the orthogroup group_3473

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3473

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q48215 6.32e-82 250 44 3 271 3 HI_1695 Uncharacterized glycosyltransferase HI_1695 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q46635 1.83e-78 241 43 2 268 3 amsE Amylovoran biosynthesis glycosyltransferase AmsE Erwinia amylovora
Q03084 1.04e-53 178 36 3 267 1 wbbD UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase Escherichia coli
P71054 1.88e-25 104 27 7 270 2 epsE Putative glycosyltransferase EpsE Bacillus subtilis (strain 168)
Q4KXC9 7.13e-17 81 30 7 197 1 wbnJ O-antigen biosynthesis glycosyltransferase WbnJ Escherichia coli
Q58457 9.23e-13 70 28 6 208 3 MJ1057 Uncharacterized glycosyltransferase MJ1057 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57287 4.08e-10 62 27 7 200 3 HI_1578 Uncharacterized glycosyltransferase HI_1578 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q54QG0 8.71e-10 62 40 4 112 1 pgtA Bifunctional glycosyltransferase pgtA Dictyostelium discoideum
Q5HKQ0 3.61e-08 57 27 5 186 1 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q8GLC5 6.99e-08 56 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus epidermidis
Q8NUI7 1.6e-07 55 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus aureus (strain MW2)
Q6G608 1.6e-07 55 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus aureus (strain MSSA476)
Q6GDD8 2.97e-07 54 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus aureus (strain MRSA252)
Q7A351 2.97e-07 54 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus aureus (strain N315)
Q99QX3 2.97e-07 54 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HCN1 2.97e-07 54 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus aureus (strain COL)
Q9RQP9 2.97e-07 54 27 5 186 3 icaA Poly-beta-1,6-N-acetyl-D-glucosamine synthase Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q4UM29 2.99e-06 51 26 6 192 3 RF_0543 Uncharacterized glycosyltransferase RF_0543 Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92IF9 5.74e-06 50 26 6 192 3 RC0461 Uncharacterized glycosyltransferase RC0461 Rickettsia conorii (strain ATCC VR-613 / Malish 7)
A2DZE8 4.45e-05 47 32 4 99 1 ALG5A Dolichyl-phosphate beta-glucosyltransferase ALG5A Trichomonas vaginalis (strain ATCC PRA-98 / G3)
Q57022 5e-05 47 28 4 119 3 HI_0868 Uncharacterized glycosyltransferase HI_0868 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q68X33 5.27e-05 47 23 7 212 3 RT0329 Uncharacterized glycosyltransferase RT0329 Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q9ZDI9 8.23e-05 47 23 8 211 3 RP339 Uncharacterized glycosyltransferase RP339 Rickettsia prowazekii (strain Madrid E)
Q6GV29 0.000515 44 23 3 134 1 B3gntl1 Queuosine-tRNA galactosyltransferase Rattus norvegicus
A2DSR8 0.001 43 30 3 92 1 ALG5E Dolichyl-phosphate beta-glucosyltransferase ALG5E Trichomonas vaginalis (strain ATCC PRA-98 / G3)
P22639 0.001 43 26 4 139 3 alr2836 Uncharacterized glycosyltransferase alr2836 Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17210
Feature type CDS
Gene -
Product glycosyltransferase
Location 74041 - 74853 (strand: 1)
Length 813 (nucleotides) / 270 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3473
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF00535 Glycosyl transferase family 2

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0463 Cell wall/membrane/envelope biogenesis (M) M Glycosyltransferase involved in cell wall bisynthesis

Protein Sequence

MKFSILLSVYFKENAIFLNDSLNRIINNSEKPTEVVIVKDGPLTDQLNLTIENWEKEYPNIIKTIDLPENIGLGKALNEGIKHCSNEWIFRMDTDDICLPNRFKKQINYLQENPHISLLGGNIEEFNEDMTESNGQRNIAIEHNNILKLAKKRNPFNHVTVAFKKSAVLAVGGYQHHLYMEDYNLWIRMISSDYKTHNLQDVLVNVRAGTIMVSRRRGLKYIKSELQLAKLKIKLKIDTPLSATLIFAMRSIPRLLPTSILNIIYKKLRK

Flanking regions ( +/- flanking 50bp)

TCTGGGCTATTATATTTTATCCTTAATAAACGATTACAGAGATCCCTTGAATGAAATTCTCTATTTTACTATCTGTTTATTTTAAAGAAAATGCAATTTTCCTTAATGACAGTTTAAATAGAATCATAAATAACTCAGAAAAACCAACAGAAGTTGTTATTGTTAAAGATGGGCCTTTAACTGACCAATTGAACTTAACCATTGAAAACTGGGAAAAAGAATATCCGAATATAATCAAAACTATAGACTTACCTGAAAATATAGGGCTAGGTAAAGCATTAAATGAAGGAATTAAACATTGTTCAAATGAATGGATTTTTAGGATGGATACGGATGATATCTGTTTACCTAACCGATTTAAAAAACAAATTAATTACCTTCAAGAAAATCCCCATATTTCACTACTTGGTGGAAATATAGAAGAATTTAATGAGGATATGACTGAGTCAAATGGTCAGCGTAATATTGCTATTGAACATAATAACATTCTGAAGCTAGCAAAAAAACGTAATCCTTTCAATCATGTCACCGTTGCATTTAAGAAAAGTGCGGTACTGGCTGTTGGTGGATATCAGCATCATTTATATATGGAAGATTACAACCTCTGGATAAGAATGATTTCCAGTGATTATAAAACGCATAACCTACAGGATGTATTAGTTAATGTACGAGCCGGAACTATAATGGTTTCACGTCGTCGTGGATTAAAATATATAAAAAGTGAGCTACAACTTGCTAAGCTAAAAATAAAATTAAAAATTGACACACCACTCTCAGCAACTTTAATCTTTGCTATGCGCAGTATCCCCCGACTTTTACCAACTTCAATTCTGAATATTATTTATAAAAAATTAAGAAAATAGAAGGCATTTATGATAACCATCATCGGCGGCTCAGGCTTTATCGGTACACG