Homologs in group_3858

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS11740 PMI_RS11740 35.1 Proteus mirabilis HI4320 - DNA-binding protein

Distribution of the homologs in the orthogroup group_3858

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3858

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16720
Feature type CDS
Gene -
Product hypothetical protein
Location 166643 - 167392 (strand: -1)
Length 750 (nucleotides) / 249 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3858
Orthogroup size 2
N. genomes 2

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Genomic region

Protein Sequence

METFGIVTLTVVIIAIFLRWRFATRKTENTGDITFKSDYEIDDYEAEINSAVFEVRRCRTLVDKIQLCHQLTRLCEGIFGDYEDNDVYNELSQTLDKSFIFRYSAFITLYPEPQTETALERIYLTQTKQLCPENMIRHHFDGCYISDETPAEINIAIDDFFSLMVNVAYDGETGYYIESDDETPAALTNTIHNITRDDLIAWFDDELVFRSFLAVTFLNACRDKIEAEEKAKLKTTNSATVKTGNKIVK

Flanking regions ( +/- flanking 50bp)

TTCAGTTAAAACGATGCTGCTGAAGCACTAATGATATAAGGAAGTTATTCATGGAAACGTTCGGCATAGTCACCCTGACAGTAGTTATTATCGCCATTTTTTTACGCTGGCGATTTGCTACCCGTAAAACAGAAAATACGGGTGATATTACGTTTAAATCCGATTATGAAATTGATGACTATGAAGCCGAGATTAATTCGGCAGTATTTGAAGTGCGCCGCTGCCGGACACTGGTGGATAAAATCCAGCTCTGCCATCAGTTGACCCGCTTGTGTGAGGGGATTTTCGGTGATTATGAAGATAACGATGTTTACAACGAACTAAGTCAAACGCTGGATAAATCCTTTATTTTTAGGTATTCGGCGTTTATTACCCTTTATCCGGAGCCTCAGACAGAAACGGCACTGGAACGTATTTATCTGACCCAGACGAAACAACTTTGCCCGGAAAATATGATACGTCATCACTTTGATGGCTGTTATATTTCCGATGAAACGCCGGCAGAGATTAATATCGCCATCGATGATTTTTTTTCGCTGATGGTCAATGTAGCTTACGATGGAGAAACAGGTTATTACATTGAGTCTGATGACGAAACACCGGCCGCGCTAACCAATACTATCCATAATATCACGCGGGATGACTTAATCGCATGGTTTGATGATGAGTTGGTTTTCCGTTCATTTTTAGCCGTCACGTTTTTAAATGCCTGCCGCGATAAGATTGAGGCAGAAGAGAAGGCAAAACTAAAAACAACAAATTCGGCGACGGTTAAAACAGGAAACAAAATAGTAAAATAAGATATGTGGCGATTTGCCTGCTTTTTCCGCCTGCACACTTTGGGAAATAA