Homologs in group_302

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07975 FBDBKF_07975 30.9 Morganella morganii S1 - Ca2+-binding protein, RTX toxin-related
EHELCC_13805 EHELCC_13805 30.9 Morganella morganii S2 - Ca2+-binding protein, RTX toxin-related
NLDBIP_14250 NLDBIP_14250 30.9 Morganella morganii S4 - Ca2+-binding protein, RTX toxin-related
LHKJJB_08600 LHKJJB_08600 30.9 Morganella morganii S3 - Ca2+-binding protein, RTX toxin-related
HKOGLL_08150 HKOGLL_08150 30.9 Morganella morganii S5 - Ca2+-binding protein, RTX toxin-related
F4V73_RS13010 F4V73_RS13010 33.4 Morganella psychrotolerans - serralysin family metalloprotease
PMI_RS01355 PMI_RS01355 30.3 Proteus mirabilis HI4320 - serralysin family metalloprotease

Distribution of the homologs in the orthogroup group_302

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_302

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P41773 1.03e-36 146 30 8 346 3 None Lipase Pseudomonas fluorescens
P41773 0.000558 46 30 3 107 3 None Lipase Pseudomonas fluorescens
P26504 2.85e-34 139 31 7 291 1 None Lipase Pseudomonas fluorescens
Q9JYV5 1.22e-15 84 28 10 306 3 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JYV5 4.43e-15 82 28 10 306 3 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JYV5 1.4e-14 81 28 15 379 3 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JYV5 1.53e-14 81 31 8 240 3 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P55127 1.44e-15 84 29 11 307 1 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup C
P55127 8.16e-15 82 28 11 307 1 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup C
P55127 1.95e-14 80 30 11 303 1 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup C
P55127 1.6e-13 77 28 14 369 1 frpC Iron-regulated protein FrpC Neisseria meningitidis serogroup C
Q9K0K9 1.45e-14 81 31 8 240 3 frpA Iron-regulated protein FrpA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9K0K9 1.46e-14 81 27 14 378 3 frpA Iron-regulated protein FrpA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
A1YKW7 2.28e-13 77 33 6 192 1 rtxA Cytolysin RtxA Kingella kingae
P55126 2.72e-12 73 32 9 251 3 frpA Iron-regulated protein FrpA Neisseria meningitidis serogroup C
P0DKX7 4.06e-11 70 32 7 244 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0DKX7 9.91e-10 65 32 9 225 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0DKX7 0.001 46 25 5 211 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
J7QLC0 4.06e-11 70 32 7 244 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
J7QLC0 9.91e-10 65 32 9 225 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
J7QLC0 0.001 46 25 5 211 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
Q57506 4.43e-11 70 29 14 330 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q57506 7.93e-11 69 32 7 211 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q57506 6.3e-10 66 32 9 225 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q9EV34 5.16e-11 69 28 10 278 3 lktA Leukotoxin Mannheimia haemolytica
P0C083 5.34e-11 69 28 10 278 3 lktA Leukotoxin Mannheimia haemolytica
P0C084 5.34e-11 69 28 10 278 3 lktA Leukotoxin Mannheimia haemolytica
Q9EV29 5.44e-11 69 28 10 278 3 lktA Leukotoxin Mannheimia haemolytica
Q9ETX2 5.93e-11 69 28 10 278 3 lktA Leukotoxin Mannheimia glucosida
P16462 7.31e-11 69 40 2 116 1 ltxA Leukotoxin Aggregatibacter actinomycetemcomitans
P16462 3.11e-08 60 32 7 199 1 ltxA Leukotoxin Aggregatibacter actinomycetemcomitans
Q7BHI8 1.8e-10 67 28 10 278 1 lktA Leukotoxin Mannheimia haemolytica
P16535 1.8e-10 67 28 10 278 3 lktA Leukotoxin Mannheimia haemolytica
P55129 6.36e-10 66 33 2 127 3 apxIA RTX-I toxin determinant A from serotypes 5/10 Actinobacillus pleuropneumoniae
P55128 7.05e-10 65 33 2 127 1 apxIA RTX-I toxin determinant A from serotypes 1/9 Actinobacillus pleuropneumoniae
P55118 8.24e-10 65 27 10 278 3 lktA Leukotoxin Mannheimia haemolytica
Q9ZFG9 1e-09 65 31 7 246 1 algE7 Alginate lyase 7 Azotobacter vinelandii
Q9RCG8 1.54e-09 65 31 4 187 3 paxA Exotoxin PaxA Pasteurella aerogenes
Q9RCG8 1.48e-08 61 32 8 183 3 paxA Exotoxin PaxA Pasteurella aerogenes
P0C085 2.03e-09 64 29 7 216 3 lktA Leukotoxin Mannheimia haemolytica
Q9EV27 2.03e-09 64 29 7 216 3 lktA Leukotoxin Mannheimia haemolytica
P55131 2.17e-09 64 32 7 208 3 apxIIIA RTX-III toxin determinant A from serotype 8 Actinobacillus pleuropneumoniae
P55131 6.91e-07 56 34 2 125 3 apxIIIA RTX-III toxin determinant A from serotype 8 Actinobacillus pleuropneumoniae
Q9EV32 2.37e-09 64 29 7 216 3 lktA Leukotoxin Mannheimia haemolytica
Q9EV33 2.61e-09 64 29 7 216 3 lktA Leukotoxin Mannheimia haemolytica
Q9EV31 3.34e-09 63 28 7 215 3 lktA Leukotoxin Mannheimia haemolytica
Q9EV30 3.52e-09 63 28 10 263 3 lktA Leukotoxin Mannheimia haemolytica
P55117 3.52e-09 63 28 7 215 3 lktA Leukotoxin Bibersteinia trehalosi
P23694 1.25e-08 61 34 2 132 1 None Serralysin Serratia marcescens
P07268 1.47e-08 61 34 2 132 1 None Serralysin Serratia marcescens (strain ATCC 21074 / E-15)
Q44494 2.98e-08 60 27 6 258 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q44494 7.19e-06 53 25 6 237 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q44494 2.84e-05 51 43 1 72 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q44494 0.001 46 34 2 104 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q00951 3.55e-08 60 28 5 204 3 appA Hemolysin Actinobacillus suis
P15377 4.04e-08 60 28 5 204 3 apxIIA RTX-II toxin determinant A Actinobacillus pleuropneumoniae
Q44496 5.63e-08 60 27 7 238 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 2.26e-05 51 53 1 58 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 0.000329 47 26 8 234 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 0.000421 47 46 0 64 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
P16317 5.8e-08 59 52 2 67 1 prtC Serralysin C Dickeya chrysanthemi
P55130 1.03e-07 58 32 8 208 3 apxIIIA RTX-III toxin determinant A from serotype 2 Actinobacillus pleuropneumoniae
P55130 2.21e-06 54 31 4 151 3 apxIIIA RTX-III toxin determinant A from serotype 2 Actinobacillus pleuropneumoniae
P08715 1.16e-07 58 33 6 163 1 hlyA Hemolysin, plasmid Escherichia coli
P09983 1.53e-07 58 29 5 164 1 hlyA Hemolysin, chromosomal Escherichia coli
Q7N8R3 2.84e-07 57 48 0 66 3 prtA Serralysin Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q44495 4.71e-07 57 32 8 213 1 algE2 Mannuronan C5-epimerase AlgE2 Azotobacter vinelandii
Q44495 0.000119 48 40 1 89 1 algE2 Mannuronan C5-epimerase AlgE2 Azotobacter vinelandii
Q44495 0.000374 47 52 0 50 1 algE2 Mannuronan C5-epimerase AlgE2 Azotobacter vinelandii
P73817 4.8e-07 57 44 4 103 1 sll1951 S-layer protein Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q03023 5.26e-07 56 48 0 68 1 aprA Serralysin Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P19144 6.87e-07 55 41 0 80 1 prtC Serralysin C Dickeya chrysanthemi
P82115 7.63e-07 55 48 0 66 1 prtA Serralysin Photorhabdus sp. (strain Az29)
Q07295 8.1e-07 55 49 2 67 1 prtA Serralysin A Dickeya chrysanthemi
P16316 9.2e-07 55 50 2 67 1 prtB Serralysin B Dickeya chrysanthemi
Q84F70 1.13e-06 55 46 0 66 3 prtA1 Serralysin Photorhabdus luminescens
A0A0C5CJR8 5.58e-06 52 41 0 80 1 aprA Metallopeptidase AprA Pseudomonas marginalis
Q11137 6.43e-06 52 52 0 46 3 zapA Serralysin Proteus mirabilis
Q11137 0.000114 48 44 0 50 3 zapA Serralysin Proteus mirabilis
Q44492 9.68e-06 52 41 1 89 2 algE5 Mannuronan C5-epimerase AlgE5 Azotobacter vinelandii
Q44492 8.66e-05 49 57 0 49 2 algE5 Mannuronan C5-epimerase AlgE5 Azotobacter vinelandii
Q44492 0.000122 48 27 6 232 2 algE5 Mannuronan C5-epimerase AlgE5 Azotobacter vinelandii
Q1ID47 1.7e-05 51 47 1 63 1 aprA Metalloprotease AprA Pseudomonas entomophila (strain L48)
Q07162 3.69e-05 50 44 0 68 1 prtG Serralysin G Dickeya chrysanthemi
Q9ZFH0 0.001 46 40 1 70 1 algE6 Mannuronan C5-epimerase AlgE6 Azotobacter vinelandii

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16265
Feature type CDS
Gene -
Product calcium-binding protein
Location 63967 - 65796 (strand: -1)
Length 1830 (nucleotides) / 609 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_302
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00353 RTX calcium-binding nonapeptide repeat (4 copies)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2931 Secondary metabolites biosynthesis, transport and catabolism (Q) Q Ca2+-binding protein, RTX toxin-related

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01406 serralysin [EC:3.4.24.40] Cationic antimicrobial peptide (CAMP) resistance -

Protein Sequence

MITAKKIAMYDNLHTQIGFFPIGKVITHLLEPLSNAFNWMPSKMDVGIPAGWRELKPAELNLPNSAVDRFGYYKVTSPVTGKIFPSQGLQSHILGEFDDHNQLTKITLSWTGTNDLVDMIDYTQINNGNIAKHLEPLLEAVKDLAIKNNLAPEDIIITGNSLGGGMVNINAAAKETLAGGFFKDSNYIAFASPNIHDDGTVLNIGFENDGVFRITGDATSFIGAILDMKPLFVNADKDYNSTLNNIISFDDPHSLSLVGGGSYLSKSILNVPISWTPHVMNMVTDSWERIAASKFYPLLNKDSVVIVDNLSQLMRHTKWVGDIYQNTGHYGKPAFILGNEYGNMLKGNDAGDYISAGGGNDKIKPGLGADVIDGGTGTDTLMLHGFARDWDIYNVDNFVYFRAKDGTGMKKTESIEKVEFAKECYKTFDVNDQNLSYESGFIFKTKETVQYKNAVIGTDGDDDLTGSVVFGLGGNNTLHALKIASLLVGGEGNDILLGNDGNDELYGGEGNDFLYGGKGNDILFGGIGNDIFHFDKNSGGKTDIMDLNQYAHDKDTVQFTSDMFKDVCDVLLHARDVKGNVVISDAQNTITIHDYSIDLLIQNQVLSVV

Flanking regions ( +/- flanking 50bp)

TGATGATATTTAATTATAAAGATTATACAGCGCAGGAATCAATAGATTTAATGATAACTGCTAAAAAAATTGCTATGTATGATAACTTACATACACAGATTGGTTTTTTTCCTATAGGGAAAGTAATTACACATTTACTTGAGCCATTATCTAATGCATTTAACTGGATGCCAAGTAAAATGGACGTGGGTATTCCTGCCGGATGGCGGGAATTAAAACCAGCCGAACTTAATTTACCAAATAGTGCCGTGGACCGCTTTGGTTATTATAAAGTAACCAGTCCGGTTACCGGTAAAATTTTTCCATCTCAGGGTTTGCAATCGCATATTTTAGGTGAATTTGATGATCATAACCAGCTGACAAAGATCACGCTATCCTGGACCGGAACAAATGACCTTGTTGATATGATTGACTATACTCAAATAAACAACGGAAATATTGCAAAGCATCTTGAGCCTTTGCTGGAAGCGGTTAAAGATCTGGCGATTAAAAATAATCTGGCACCTGAAGATATTATCATTACCGGTAATAGCCTGGGGGGTGGTATGGTTAATATTAATGCTGCGGCGAAAGAAACCCTGGCAGGTGGTTTTTTTAAGGATTCAAATTATATTGCGTTTGCCAGTCCGAATATTCATGATGATGGTACTGTATTGAATATCGGATTTGAAAATGATGGTGTATTTCGTATTACAGGAGATGCAACCTCATTTATCGGCGCTATTTTAGATATGAAGCCGCTTTTTGTTAATGCGGATAAAGATTATAACTCTACACTTAATAACATTATATCTTTTGATGACCCTCATTCCCTTTCTCTGGTCGGCGGTGGCAGCTATCTGAGTAAGAGTATACTGAATGTTCCGATCAGCTGGACGCCGCATGTTATGAATATGGTGACAGATAGCTGGGAGCGAATTGCTGCATCTAAATTTTATCCGTTACTGAATAAAGACAGTGTTGTTATTGTGGATAATTTATCTCAGTTGATGCGCCATACCAAATGGGTGGGGGATATTTATCAGAACACCGGGCACTACGGTAAACCGGCATTTATATTAGGCAATGAATACGGCAATATGCTCAAAGGCAATGATGCCGGTGATTATATTTCTGCCGGTGGCGGTAATGATAAAATTAAACCGGGTTTAGGTGCCGATGTTATTGACGGAGGAACCGGAACAGATACCCTGATGTTGCATGGATTCGCCAGAGACTGGGATATTTACAACGTGGATAATTTTGTATATTTCCGCGCGAAAGATGGTACCGGAATGAAAAAAACAGAGTCCATTGAAAAAGTGGAATTCGCCAAAGAATGTTATAAAACCTTTGATGTAAATGATCAAAATCTGAGCTATGAATCTGGTTTTATTTTCAAAACCAAAGAGACAGTACAATATAAAAATGCGGTTATCGGCACAGACGGTGACGATGATTTAACCGGCAGTGTGGTATTTGGTCTTGGAGGTAATAATACGCTTCATGCACTGAAAATTGCCAGCTTATTAGTCGGCGGGGAAGGCAATGATATTCTTCTCGGCAATGACGGTAATGATGAGTTATACGGGGGGGAAGGTAATGACTTCCTGTATGGCGGCAAAGGTAATGACATCTTGTTTGGTGGTATCGGTAATGATATTTTCCACTTTGATAAAAACAGTGGCGGAAAAACCGATATTATGGATTTAAATCAGTACGCACATGATAAAGATACCGTTCAGTTCACCTCTGATATGTTTAAAGATGTCTGCGATGTACTGCTCCACGCCCGTGATGTAAAAGGGAATGTTGTTATCAGTGATGCACAAAATACCATTACTATTCATGATTACTCGATTGACTTACTGATTCAGAATCAGGTACTGAGTGTTGTTTAAATATCTATAATTTTAATATCATGAATAAGCCGGTTAATTATTACCGGCTT