Homologs in group_2957

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16045 FBDBKF_16045 45.8 Morganella morganii S1 - Phage holin family protein
EHELCC_18650 EHELCC_18650 45.8 Morganella morganii S2 - Phage holin family protein
NLDBIP_17480 NLDBIP_17480 45.8 Morganella morganii S4 - Phage holin family protein
LHKJJB_17180 LHKJJB_17180 45.8 Morganella morganii S3 - Phage holin family protein
HKOGLL_17215 HKOGLL_17215 45.8 Morganella morganii S5 - Phage holin family protein

Distribution of the homologs in the orthogroup group_2957

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2957

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16260
Feature type CDS
Gene -
Product hypothetical protein
Location 63540 - 63839 (strand: -1)
Length 300 (nucleotides) / 99 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2957
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MPDAGQYTIAILLSLFNVINFREKIFKLNVSIRFILVFIISCLVITLYCVMTNFFIKNIPVNFLFMPDKNYNIAVISCSAINLFVLWVYHSIKTSKETS

Flanking regions ( +/- flanking 50bp)

AGAAAATAACATTATTGTGTAATTACTTTCTTGATGTTCCCGGAGGAATTATGCCTGATGCAGGTCAGTATACAATTGCCATTTTATTAAGTCTGTTTAACGTTATTAATTTCAGAGAGAAAATATTTAAACTAAATGTATCAATAAGATTTATTTTGGTTTTTATTATTTCATGTTTAGTTATTACACTTTACTGTGTGATGACTAATTTTTTTATAAAAAATATACCCGTTAATTTTTTATTTATGCCGGATAAAAATTACAATATTGCTGTCATCTCATGTAGTGCTATTAATTTGTTTGTACTATGGGTATATCATTCAATAAAAACAAGCAAAGAGACATCATGAGATTATTTATCGCAATCTAATGCCTGGTTCTGTTCTGTATGGGGCGCGGT