Homologs in group_4173

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4173

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4173

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8BS35 6.61e-28 117 32 5 228 1 Agmo Alkylglycerol monooxygenase Mus musculus
A0JPQ8 2.84e-27 115 31 6 229 2 Agmo Alkylglycerol monooxygenase Rattus norvegicus
P9WNZ9 1.19e-26 110 31 6 221 3 erg3 C-5 sterol desaturase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNZ8 1.19e-26 110 31 6 221 3 erg3 C-5 sterol desaturase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P68434 1.19e-26 110 31 6 221 3 erg3 C-5 sterol desaturase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q5M8F9 3.3e-26 112 35 2 164 2 agmo Alkylglycerol monooxygenase Xenopus tropicalis
Q6NYE4 3.71e-26 112 37 2 166 2 agmo Alkylglycerol monooxygenase Danio rerio
Q6ZNB7 7.8e-26 111 31 5 229 1 AGMO Alkylglycerol monooxygenase Homo sapiens
O17554 9.86e-21 97 32 2 164 3 agmo-1 Alkylglycerol monooxygenase Caenorhabditis elegans
F2VS69 9.32e-16 80 29 5 197 3 olsE Ornithine lipid hydroxylase OlsE Rhizobium tropici
A0A024FA41 0.000119 47 25 5 169 3 vlmA Fatty acid hydroxylase vlmA Lecanicillium sp.
Q9Z0F5 0.000539 45 28 9 167 1 Ch25h Cholesterol 25-hydroxylase Mus musculus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16230
Feature type CDS
Gene -
Product sterol desaturase family protein
Location 57380 - 58504 (strand: -1)
Length 1125 (nucleotides) / 374 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4173
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04116 Fatty acid hydroxylase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3000 Lipid transport and metabolism (I) I Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily

Protein Sequence

MNELTFPVIFMVMIVIAEAAVIARKSPASFRWRDVVFNLNSGHIMLWLFRGLELFCYGFVVTHFSAGLTDTWPAWAVWLFALIAWDFGFYWLHRLHHKYRLLWAVHVVHHQGEHFNLSLGVRNSWYSSLTSVPFFLLLAFAGVPLSVFMAVSVLHYTIQFFNHSGLIPRLAWLEKIMVTPHHHRVHHVKDGGFANRNFGGSFILWDKLFGTFSESPGIPHRYGIGGEAATENPLIDSNRPFLRVFGIKNKPRQIRSAQYHIRDAFLVSGTLLLFVLVIGYIYRYGYGYSGTTAVQAALFVLLAAGTVALSGLAAGQQWGRVSWFVVATFILLLIIAVGWLTPFWLMSGGLLWLHSLLLLTGAGTAPAGEPDAQS

Flanking regions ( +/- flanking 50bp)

TGCCATAATGAGTGTACGGATGTTCAAAATGCCGCACAGGATCAATCTCAATGAATGAATTAACCTTTCCGGTTATTTTTATGGTGATGATAGTGATCGCGGAAGCGGCGGTGATCGCCCGCAAAAGCCCTGCGTCATTCCGCTGGCGTGATGTGGTGTTCAATCTCAATTCCGGACATATCATGCTGTGGCTGTTTCGCGGGCTGGAGTTGTTCTGCTACGGGTTTGTGGTAACTCACTTCTCCGCCGGGCTGACTGACACCTGGCCTGCGTGGGCGGTTTGGTTGTTTGCACTGATCGCATGGGATTTTGGTTTTTACTGGCTGCACAGGTTGCACCATAAATATCGTCTGTTATGGGCGGTACATGTGGTTCACCATCAGGGGGAGCACTTTAATCTCTCTCTGGGGGTGCGAAATTCCTGGTACTCTTCTCTGACATCGGTTCCGTTTTTTTTGCTGCTTGCCTTTGCAGGCGTGCCGCTCAGTGTCTTTATGGCTGTTTCGGTGCTGCATTATACTATCCAGTTTTTCAATCACAGCGGATTGATCCCGCGCCTGGCGTGGCTTGAGAAAATCATGGTTACGCCGCATCACCACCGGGTTCATCATGTTAAAGACGGCGGTTTTGCCAATCGCAATTTCGGTGGCAGTTTTATTCTCTGGGATAAACTGTTCGGGACATTTTCAGAATCCCCCGGGATACCACACCGCTACGGAATTGGTGGTGAGGCAGCAACAGAAAACCCGCTGATTGACAGCAACCGTCCGTTTTTACGGGTGTTCGGGATAAAAAATAAACCGCGACAGATTCGCTCTGCACAATACCATATCCGCGATGCGTTTTTAGTGAGCGGAACGCTGCTGCTTTTTGTACTGGTGATCGGCTATATTTATCGTTACGGCTACGGATACAGCGGCACCACGGCGGTACAGGCCGCACTGTTTGTTCTGCTTGCTGCCGGTACGGTGGCATTGTCCGGGCTGGCTGCGGGGCAGCAATGGGGGCGGGTAAGCTGGTTTGTGGTGGCAACATTCATATTACTGCTGATTATTGCTGTGGGCTGGCTGACACCGTTCTGGCTGATGTCCGGGGGACTCTTGTGGCTGCACAGTCTGCTGTTGCTTACGGGGGCGGGGACAGCACCGGCGGGGGAACCGGATGCACAATCCTGAACCATTGCCGCCGCTGGGATTTAAGTCACAGGACGATCTGGCTTTTCATC