Homologs in group_1785

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13020 FBDBKF_13020 84.4 Morganella morganii S1 traB Uncharacterized conserved protein YbaP, TraB family
EHELCC_06335 EHELCC_06335 84.4 Morganella morganii S2 traB Uncharacterized conserved protein YbaP, TraB family
NLDBIP_06655 NLDBIP_06655 84.4 Morganella morganii S4 traB Uncharacterized conserved protein YbaP, TraB family
LHKJJB_03535 LHKJJB_03535 84.4 Morganella morganii S3 traB Uncharacterized conserved protein YbaP, TraB family
HKOGLL_07010 HKOGLL_07010 84.4 Morganella morganii S5 traB Uncharacterized conserved protein YbaP, TraB family
PMI_RS10720 PMI_RS10720 48.5 Proteus mirabilis HI4320 - TraB/GumN family protein

Distribution of the homologs in the orthogroup group_1785

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1785

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77301 1.83e-84 256 52 2 251 4 ybaP Uncharacterized protein YbaP Escherichia coli (strain K12)
Q83M36 5.51e-84 255 52 2 251 4 ybaP Uncharacterized protein YbaP Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16205
Feature type CDS
Gene -
Product TraB/GumN family protein
Location 50748 - 51557 (strand: 1)
Length 810 (nucleotides) / 269 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1785
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01963 TraB/PrgY/gumN family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3735 Function unknown (S) S Uncharacterized conserved protein YbaP, TraB family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09973 uncharacterized protein - -

Protein Sequence

MKKLFHRLKEYLLSSDPQGIYTWPAVDITLPGGIALHLVGTIHMGSENMSPLPGPLLKKIAHADGLIVEADITQPAPSFPGQDPEYIRRPVSERLPEGLRDDYRRYCEEQRQPSETLDTLPAWQIALILQSTQAQNLGLRPHYGIDYQMLNAAHGQNIPVFELEGTQSQMQMLLNFPDEGMSLLEDTLTYWHDNARALQIMLGWWLDYHPEKMAQPLPETFSELTYQHLMISRNDAWKTRLNQLPPGNYVVAVGALHLYGEHNLPSILC

Flanking regions ( +/- flanking 50bp)

TTTGTTACGATTGCAGTCAACTAAGGGAATGAGTCACGACAGGAGTCGTCATGAAAAAACTGTTCCACCGGCTGAAAGAATACCTGCTTTCGTCAGATCCGCAGGGGATTTATACCTGGCCCGCCGTTGATATCACGCTGCCCGGGGGCATTGCACTCCACTTGGTCGGCACGATACATATGGGATCGGAAAATATGTCTCCGCTGCCCGGTCCGCTGCTGAAAAAAATTGCGCATGCCGATGGTCTGATTGTGGAAGCCGATATCACACAACCTGCGCCGTCATTTCCCGGGCAGGACCCGGAGTATATACGCCGCCCCGTAAGTGAGCGCTTACCAGAGGGATTGCGGGATGATTATCGCCGCTATTGTGAAGAGCAACGGCAGCCCTCAGAAACACTCGATACCCTGCCCGCCTGGCAAATCGCGCTGATCCTGCAATCCACCCAGGCACAAAACCTCGGGCTGCGTCCGCATTACGGAATTGATTATCAGATGCTGAACGCGGCGCACGGACAAAATATCCCGGTGTTTGAACTGGAAGGCACGCAATCTCAGATGCAGATGCTGCTCAATTTTCCGGATGAAGGCATGAGCCTGCTGGAAGATACACTGACCTATTGGCATGACAATGCCCGCGCCCTGCAAATTATGCTCGGCTGGTGGCTGGATTACCATCCGGAAAAAATGGCTCAGCCGCTGCCGGAAACCTTCAGTGAGCTGACTTATCAGCATCTGATGATAAGCCGCAATGACGCGTGGAAAACCCGCCTGAACCAACTGCCGCCCGGAAATTATGTGGTGGCGGTGGGTGCGCTGCATCTGTATGGCGAGCATAATCTGCCGTCAATTTTGTGCTAAACTGGCAGACCTTGTGACTCTGCCGTCTGAATTATCAGCAAGGAAATACT