Homologs in group_1780

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12980 FBDBKF_12980 94.2 Morganella morganii S1 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
EHELCC_06295 EHELCC_06295 94.2 Morganella morganii S2 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
NLDBIP_06615 NLDBIP_06615 94.2 Morganella morganii S4 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
LHKJJB_03495 LHKJJB_03495 94.2 Morganella morganii S3 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
HKOGLL_06970 HKOGLL_06970 94.2 Morganella morganii S5 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
PMI_RS10695 PMI_RS10695 81.4 Proteus mirabilis HI4320 - SPFH domain-containing protein

Distribution of the homologs in the orthogroup group_1780

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1780

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA56 0.0 521 81 0 303 3 qmcA Protein QmcA Shigella flexneri
P0AA53 0.0 521 81 0 303 1 qmcA Protein QmcA Escherichia coli (strain K12)
P0AA54 0.0 521 81 0 303 3 qmcA Protein QmcA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA55 0.0 521 81 0 303 3 qmcA Protein QmcA Escherichia coli O157:H7
P0DKS0 3.25e-145 414 66 2 291 3 qmcA Protein QmcA Wigglesworthia glossinidia brevipalpis
O26788 3.19e-75 236 44 5 275 3 MTH_692 Uncharacterized protein MTH_692 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
P72655 5.33e-70 223 40 3 282 3 slr1128 Uncharacterized protein slr1128 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P63694 1.77e-68 221 38 4 310 3 BQ2027_MB1524 Uncharacterized protein Mb1524 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WPR9 1.77e-68 221 38 4 310 1 Rv1488 Uncharacterized protein Rv1488 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPR8 1.77e-68 221 38 4 310 3 MT1533.2 Uncharacterized protein MT1533.2 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
O60121 3.41e-65 211 38 4 289 3 SPBC16G5.07c Uncharacterized protein C16G5.07c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
H2FLJ1 2.71e-54 182 36 2 263 2 stl-1 Stomatin-like protein stl-1 Caenorhabditis elegans
Q99JB2 1.65e-52 179 34 6 298 1 Stoml2 Stomatin-like protein 2, mitochondrial Mus musculus
Q32LL2 2.05e-52 179 37 5 268 2 STOML2 Stomatin-like protein 2, mitochondrial Bos taurus
Q4FZT0 2.21e-52 178 35 6 285 1 Stoml2 Stomatin-like protein 2, mitochondrial Rattus norvegicus
Q9UJZ1 2.62e-52 178 37 5 263 1 STOML2 Stomatin-like protein 2, mitochondrial Homo sapiens
Q58237 2.63e-52 173 45 2 194 3 MJ0827 Uncharacterized protein MJ0827 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O28852 4.04e-42 149 40 1 180 3 AF_1420 Uncharacterized protein AF_1420 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q9V0Y1 1.76e-39 142 33 4 279 3 PYRAB06580 Stomatin homolog PYRAB06580 Pyrococcus abyssi (strain GE5 / Orsay)
O59180 2.51e-39 142 33 4 286 1 PH1511 Stomatin homolog PH1511 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q19200 3.62e-32 125 36 3 196 3 sto-1 Stomatin-1 Caenorhabditis elegans
Q5UP73 1.35e-27 112 31 2 183 3 MIMI_R614 Putative band 7 family protein R614 Acanthamoeba polyphaga mimivirus
Q20657 2.87e-26 107 29 3 194 3 sto-3 Stomatin-3 Caenorhabditis elegans
Q8TAV4 2.73e-24 103 34 3 195 1 STOML3 Stomatin-like protein 3 Homo sapiens
Q22165 8.04e-23 99 37 3 159 3 sto-4 Stomatin-4 Caenorhabditis elegans
Q6PE84 2.44e-22 97 36 2 163 1 Stoml3 Stomatin-like protein 3 Mus musculus
Q27433 6.79e-22 99 32 2 192 1 mec-2 Mechanosensory protein 2 Caenorhabditis elegans
Q16TM5 1.56e-21 95 36 1 154 3 AAEL010189 Band 7 protein AAEL010189 Aedes aegypti
Q7PPU9 1.95e-21 95 36 1 154 3 AGAP004871 Band 7 protein AGAP004871 Anopheles gambiae
Q21190 2.5e-21 94 35 1 154 1 unc-1 Protein unc-1 Caenorhabditis elegans
P54116 7.03e-21 93 34 3 193 1 Stom Stomatin Mus musculus
P27105 8.82e-21 93 32 3 195 1 STOM Stomatin Homo sapiens
Q9VZA4 2.59e-20 94 36 1 154 2 CG42540 Band 7 protein CG42540 Drosophila melanogaster
Q19958 1.03e-18 89 33 1 154 3 sto-2 Stomatin-2 Caenorhabditis elegans
Q91X05 6.57e-18 86 31 1 154 1 Nphs2 Podocin Mus musculus
Q8K4G9 7.34e-18 86 31 1 154 1 Nphs2 Podocin Rattus norvegicus
Q9NP85 2.99e-15 79 31 1 138 1 NPHS2 Podocin Homo sapiens
Q9SRH6 3.82e-14 74 26 6 254 1 HIR3 Hypersensitive-induced response protein 3 Arabidopsis thaliana
Q5GI04 2.61e-13 72 24 7 268 1 HIR1 Hypersensitive-induced reaction 1 protein Capsicum annuum
P44546 6.07e-12 69 24 7 231 3 hflK Protein HflK Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q6K550 3.3e-11 66 24 8 254 3 HIRL2 Hypersensitive-induced response protein-like protein 2 Oryza sativa subsp. japonica
P0ABC7 3.71e-11 67 24 5 211 1 hflK Modulator of FtsH protease HflK Escherichia coli (strain K12)
P0ABC8 3.71e-11 67 24 5 211 3 hflK Protein HflK Escherichia coli O157:H7
Q9FM19 3.74e-11 66 24 8 286 1 HIR1 Hypersensitive-induced response protein 1 Arabidopsis thaliana
Q9KV09 7.73e-11 65 23 3 227 3 hflK Protein HflK Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q6L4S3 1.66e-10 64 22 6 261 2 HIRL1 Hypersensitive-induced response protein-like protein 1 Oryza sativa subsp. japonica
Q6ZIV7 2.99e-10 63 23 8 271 1 HIR1 Hypersensitive-induced response protein 1 Oryza sativa subsp. japonica
Q9CAR7 5.43e-10 62 24 8 301 1 HIR2 Hypersensitive-induced response protein 2 Arabidopsis thaliana
Q9FHM7 7.88e-10 62 21 6 256 1 HIR4 Hypersensitive-induced response protein 4 Arabidopsis thaliana
P40606 1.27e-09 62 21 10 317 3 hflC Protein HflC Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9UBI4 1.56e-09 62 24 4 176 1 STOML1 Stomatin-like protein 1 Homo sapiens
Q8CI66 4.34e-09 60 25 1 140 2 Stoml1 Stomatin-like protein 1 Mus musculus
Q8K914 8.98e-09 59 23 5 225 3 hflK Protein HflK Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9KV08 1.2e-08 58 22 8 279 3 hflC Protein HflC Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P40605 2.38e-08 58 23 3 214 3 hflK Protein HflK Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P57631 1.63e-06 52 21 5 211 3 hflK Protein HflK Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P0ABC6 8.18e-06 50 20 6 265 3 hflC Modulator of FtsH protease HflC Shigella flexneri
P0ABC3 8.18e-06 50 20 6 265 1 hflC Modulator of FtsH protease HflC Escherichia coli (strain K12)
P0ABC4 8.18e-06 50 20 6 265 3 hflC Modulator of FtsH protease HflC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABC5 8.18e-06 50 20 6 265 3 hflC Modulator of FtsH protease HflC Escherichia coli O157:H7
P44545 9.54e-06 50 19 8 256 3 hflC Protein HflC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8K915 2.24e-05 48 18 6 279 3 hflC Protein HflC Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
O32076 0.000394 45 21 4 202 1 floT Flotillin-like protein FloT Bacillus subtilis (strain 168)
O83151 0.000522 44 20 6 194 3 hflK Protein HflK Treponema pallidum (strain Nichols)
P16148 0.00053 43 21 3 168 2 PPLZ12 Protein PPLZ12 Lupinus polyphyllus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16165
Feature type CDS
Gene -
Product SPFH domain-containing protein
Location 36381 - 37319 (strand: 1)
Length 939 (nucleotides) / 312 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1780
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01145 SPFH domain / Band 7 family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0330 Posttranslational modification, protein turnover, chaperones (O) O Regulator of protease activity HflC, stomatin/prohibitin superfamily

Protein Sequence

MDLFSLGFVPIIILIAVIIVATGVKTVPQGFQWTVERFGRYTKTLQPGLHIIVPFMDRVGRKINMMEQVLDIPSQEVISRDNANVTIDAVCFIQVVDPVRAAYEVSNLNLAIINLTMTNFRTVLGSMELDEMLSQRDSINSRLLHIVDEATNPWGIKITRIEIRDVRPPKELISAMNAQMKAERTKRADILEAEGIRQAAILKAEGEKQSQILKAEGLRQSAFLEAEARERGAEAEARATQMVSDAISNGDMQAINYFIAQKYTDALAKIGSADNSKVIMMPLEASNLMGAIGGVAEMFNVSKDKNSQGKSA

Flanking regions ( +/- flanking 50bp)

TACGCGAATAAATTATTTAACTGACTCATTACTGATAAGGATTTTGGCTCATGGATTTGTTCTCGCTGGGTTTTGTCCCGATTATTATTTTAATCGCCGTTATTATCGTAGCAACGGGCGTCAAAACCGTTCCGCAGGGCTTTCAATGGACGGTTGAGCGTTTCGGTCGTTACACTAAAACATTGCAGCCGGGTCTGCACATTATTGTCCCGTTTATGGATCGCGTTGGTCGTAAAATCAACATGATGGAACAGGTACTTGATATTCCGTCACAGGAAGTTATTTCCCGCGATAACGCCAACGTAACTATCGATGCAGTCTGCTTTATTCAGGTTGTTGACCCGGTTCGCGCGGCTTATGAAGTCAGTAACCTGAATTTAGCTATCATCAACCTGACCATGACCAACTTCCGTACCGTGCTTGGCTCGATGGAACTGGATGAAATGCTGTCTCAGCGTGATTCTATCAACTCCCGCCTGCTGCATATTGTTGATGAAGCAACTAACCCGTGGGGGATTAAAATCACCCGTATCGAAATCCGTGACGTGCGTCCGCCGAAAGAACTGATTTCAGCGATGAACGCCCAGATGAAAGCAGAGCGTACCAAGCGTGCTGATATCCTGGAAGCGGAAGGTATCCGTCAGGCGGCCATCCTGAAAGCAGAGGGTGAGAAACAATCTCAGATCCTCAAGGCGGAAGGTTTACGCCAGTCTGCGTTCCTGGAAGCAGAAGCCCGTGAGCGTGGTGCAGAAGCGGAAGCCCGTGCAACTCAGATGGTTTCTGATGCAATTTCAAATGGTGATATGCAGGCAATTAACTACTTTATCGCCCAGAAATATACCGATGCACTGGCTAAAATCGGTTCTGCTGACAACAGCAAAGTGATCATGATGCCACTTGAAGCCAGCAACCTGATGGGTGCTATCGGCGGCGTGGCTGAAATGTTTAATGTATCAAAAGATAAAAACAGTCAGGGTAAATCTGCATGATTGAACTGATCGCATCGCAGGCAATGTGGTTCTGGCTCTGTTTCGGCGGT