Homologs in group_2675

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04885 FBDBKF_04885 92.3 Morganella morganii S1 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
EHELCC_06175 EHELCC_06175 92.3 Morganella morganii S2 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
NLDBIP_06495 NLDBIP_06495 92.3 Morganella morganii S4 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
LHKJJB_03375 LHKJJB_03375 92.3 Morganella morganii S3 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily
HKOGLL_06850 HKOGLL_06850 92.3 Morganella morganii S5 hflC Regulator of protease activity HflC, stomatin/prohibitin superfamily

Distribution of the homologs in the orthogroup group_2675

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2675

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16025
Feature type CDS
Gene -
Product SPFH domain-containing protein
Location 11891 - 12862 (strand: -1)
Length 972 (nucleotides) / 323 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2675
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01145 SPFH domain / Band 7 family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0330 Posttranslational modification, protein turnover, chaperones (O) O Regulator of protease activity HflC, stomatin/prohibitin superfamily

Protein Sequence

MQMMQAGNTVKLKSVIKLVVIAAILFIAGITGFNSYTIVQDGSVKVGTFLGKVNPVAYDAGLHFPINPFMVFDTYSTKDIRVSLKELRVPSQDKLKSIVDITVMLQFDGAKAPILRINGGTESEALDKYVRQKLISTILEFGKDVANAQDLYTADTQRKLQESIRDAIQGYASPYGYTIKEIMIQDITLPEVVQEQVVNTKMRQEQINQAKAEAEKERELAQKKVVVAEAERESSEQQAIARERNAQASSFAMRQEADARLYAAQKEAEGNAILQRTITREMISWKQLEIEQVKAHKYKGEVPNIVVGADYDGKMIMDMRSQQ

Flanking regions ( +/- flanking 50bp)

ATTTATAAAAATGATTTTTTAACTGAGAATGACCTTATGGGGATAAGTGAATGCAAATGATGCAGGCAGGGAATACAGTCAAACTGAAATCAGTGATTAAATTGGTTGTTATTGCGGCAATCCTTTTTATCGCGGGGATCACCGGTTTTAATTCGTATACGATTGTGCAGGATGGTTCGGTAAAAGTGGGTACATTTTTAGGGAAGGTCAATCCGGTTGCGTATGATGCCGGGCTGCATTTCCCGATAAACCCGTTTATGGTGTTTGATACTTACTCCACAAAAGATATCCGCGTGTCACTGAAAGAGTTGCGTGTGCCCTCGCAGGATAAATTAAAATCCATTGTTGATATTACCGTTATGCTGCAGTTTGATGGCGCAAAAGCACCAATACTGCGGATTAATGGCGGGACGGAAAGTGAAGCGCTGGATAAATATGTCCGCCAGAAACTGATCTCCACTATTCTCGAGTTCGGAAAAGATGTGGCGAATGCACAGGATTTATACACTGCGGATACTCAGCGTAAATTACAGGAATCTATCCGTGATGCAATACAGGGTTACGCCTCACCTTATGGTTATACGATTAAAGAAATTATGATCCAGGATATTACGTTACCGGAAGTTGTTCAGGAGCAGGTGGTAAATACCAAGATGCGTCAGGAACAAATAAATCAGGCGAAAGCAGAAGCAGAGAAAGAGCGTGAATTAGCACAGAAAAAAGTGGTTGTCGCAGAAGCTGAGCGTGAATCGTCAGAGCAGCAGGCGATAGCCCGTGAACGAAATGCACAGGCCAGCTCATTTGCTATGCGTCAGGAAGCCGATGCAAGATTATATGCCGCTCAGAAAGAAGCGGAAGGTAATGCCATATTACAACGTACTATTACCCGTGAAATGATCAGTTGGAAGCAACTGGAGATTGAGCAGGTAAAAGCGCACAAATATAAAGGTGAAGTCCCTAATATTGTTGTTGGTGCCGATTATGACGGAAAAATGATCATGGATATGCGCAGCCAGCAGTAAAAAAATAATAAAAAAAGTAATACCCGTTACGAAACCGCTATGTACTCTGT