Homologs in group_1084

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06160 FBDBKF_06160 89.4 Morganella morganii S1 ptrA pitrilysin
EHELCC_09205 EHELCC_09205 89.4 Morganella morganii S2 ptrA pitrilysin
NLDBIP_09585 NLDBIP_09585 89.4 Morganella morganii S4 ptrA pitrilysin
LHKJJB_08170 LHKJJB_08170 89.4 Morganella morganii S3 ptrA pitrilysin
HKOGLL_07720 HKOGLL_07720 89.4 Morganella morganii S5 ptrA pitrilysin
PMI_RS11425 PMI_RS11425 54.4 Proteus mirabilis HI4320 ptrA pitrilysin

Distribution of the homologs in the orthogroup group_1084

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1084

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZMB5 0.0 930 47 1 959 3 ptrA Protease 3 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q83QC3 0.0 928 48 1 937 3 ptrA Protease 3 Shigella flexneri
P05458 0.0 927 48 1 937 1 ptrA Protease 3 Escherichia coli (strain K12)
Q8Z418 0.0 925 47 1 959 3 ptrA Protease 3 Salmonella typhi
Q8CVS2 0.0 924 47 3 960 3 ptrA Protease 3 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X6M8 0.0 918 47 1 937 3 ptrA Protease 3 Escherichia coli O157:H7
Q24K02 1.09e-113 377 28 14 913 2 IDE Insulin-degrading enzyme Bos taurus
P14735 2.51e-113 376 28 14 914 1 IDE Insulin-degrading enzyme Homo sapiens
Q9JHR7 1.22e-111 371 27 14 926 1 Ide Insulin-degrading enzyme Mus musculus
P35559 2.27e-111 370 27 14 920 1 Ide Insulin-degrading enzyme Rattus norvegicus
O22941 1.98e-108 362 27 13 906 2 PXM16 Insulin-degrading enzyme-like 1, peroxisomal Arabidopsis thaliana
P22817 7.05e-105 352 27 13 910 1 Ide Insulin-degrading enzyme Drosophila melanogaster
Q06010 4.22e-101 343 27 17 935 1 STE23 A-factor-processing enzyme Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
F4J3D9 6.12e-95 325 26 12 905 3 At3g57470 Insulin-degrading enzyme-like 2 Arabidopsis thaliana
O14077 1.28e-88 307 25 13 891 1 mug138 Putative zinc protease mug138 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
F4HNU6 3.92e-86 301 25 20 900 2 At1g06900 Nardilysin-like Arabidopsis thaliana
Q5R4H6 2.79e-74 269 25 20 896 2 NRDC Nardilysin Pongo abelii
O43847 7.65e-74 268 25 20 896 1 NRDC Nardilysin Homo sapiens
Q8BHG1 2.47e-72 263 25 22 900 1 Nrdc Nardilysin Mus musculus
P47245 5.24e-72 263 25 22 900 1 Nrdc Nardilysin Rattus norvegicus
Q54JQ2 1.81e-56 214 23 23 853 3 DDB_G0287851 Insulin-degrading enzyme homolog Dictyostelium discoideum
Q10040 2.14e-50 195 30 3 392 3 C28F5.4 Putative zinc protease C28F5.4 Caenorhabditis elegans
P42789 9.69e-38 154 26 8 461 2 None Sporozoite developmental protein Eimeria bovis
Q88A79 6.96e-34 143 31 6 304 3 pqqF Coenzyme PQQ synthesis protein F Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q9I2D2 6.53e-32 137 32 6 302 3 pqqF Coenzyme PQQ synthesis protein F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9I2D2 2.28e-05 52 30 0 115 3 pqqF Coenzyme PQQ synthesis protein F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P40851 1.51e-29 130 36 5 230 1 AXL1 Putative protease AXL1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P55174 9.24e-27 121 30 9 298 3 pqqF Coenzyme PQQ synthesis protein F Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
Q88QV3 1.59e-24 114 33 4 233 3 pqqF Coenzyme PQQ synthesis protein F Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P55679 5.54e-18 92 29 4 232 3 NGR_a01040 Uncharacterized zinc protease y4wA Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P27508 2.97e-13 77 31 3 200 3 pqqF Coenzyme PQQ synthesis protein F Klebsiella pneumoniae
Q4W6B5 1.25e-10 68 23 9 290 1 mppB Mitochondrial-processing peptidase subunit beta Dictyostelium discoideum
O86835 2.74e-09 64 25 2 191 3 SCO5738 Uncharacterized zinc protease SCO5738 Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9P7X1 3.34e-07 57 26 3 212 1 qcr1 Probable mitochondrial-processing peptidase subunit beta Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q00302 5.28e-07 57 26 3 212 3 MPP1 Mitochondrial-processing peptidase subunit beta Blastocladiella emersonii
O32965 8.02e-07 56 24 3 219 3 ML0855 Uncharacterized zinc protease ML0855 Mycobacterium leprae (strain TN)
Q42290 1.02e-06 56 23 2 223 1 MPPbeta Probable mitochondrial-processing peptidase subunit beta, mitochondrial Arabidopsis thaliana
O42908 4.45e-06 54 20 8 371 3 cym1 Presequence protease, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q04805 8.85e-06 53 28 1 125 3 ymxG Uncharacterized zinc protease YmxG Bacillus subtilis (strain 168)
O25656 1.77e-05 52 22 5 222 1 pqqE Zinc protease PqqE Helicobacter pylori (strain ATCC 700392 / 26695)
O31766 3.94e-05 50 22 5 218 3 ymfH Uncharacterized zinc protease YmfH Bacillus subtilis (strain 168)
Q6C0U8 5.88e-05 50 21 10 355 3 CYM1 Presequence protease, mitochondrial Yarrowia lipolytica (strain CLIB 122 / E 150)
B8B0E2 6.72e-05 50 26 5 164 1 OsI_23765 Stromal processing peptidase, chloroplastic Oryza sativa subsp. indica
Q68XF0 7.18e-05 50 21 2 207 3 RT0210 Uncharacterized zinc protease RT0210 Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q69TY5 7.26e-05 50 28 4 137 2 SPP Stromal processing peptidase, chloroplastic Oryza sativa subsp. japonica
Q9FIH8 7.53e-05 50 26 6 167 2 SPP Stromal processing peptidase, chloroplastic Arabidopsis thaliana
P11913 8.59e-05 50 23 2 212 1 pep Mitochondrial-processing peptidase subunit beta Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
O05945 0.000128 49 21 2 207 3 RP219 Uncharacterized zinc protease RP219 Rickettsia prowazekii (strain Madrid E)
P45181 0.0002 49 24 12 280 3 pqqL Probable zinc protease PqqL Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q10068 0.000216 49 30 1 83 4 SPAC3H1.02c Uncharacterized protein C3H1.02c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q92IX7 0.000348 47 21 2 207 3 RC0293 Uncharacterized zinc protease RC0293 Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q5REK3 0.000388 47 23 3 216 2 PMPCB Mitochondrial-processing peptidase subunit beta Pongo abelii
P10507 0.000437 47 24 4 201 1 MAS1 Mitochondrial-processing peptidase subunit beta Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O75439 0.000461 47 23 3 216 1 PMPCB Mitochondrial-processing peptidase subunit beta Homo sapiens
Q3SZ71 0.000529 47 23 3 216 2 PMPCB Mitochondrial-processing peptidase subunit beta Bos taurus
P31828 0.000641 47 23 6 204 1 pqqL Probable zinc protease PqqL Escherichia coli (strain K12)
Q10713 0.001 46 28 0 105 1 PMPCA Mitochondrial-processing peptidase subunit alpha Homo sapiens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15755
Feature type CDS
Gene ptrA
Product pitrilysin
Location 154078 - 156960 (strand: 1)
Length 2883 (nucleotides) / 960 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1084
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00675 Insulinase (Peptidase family M16)
PF05193 Peptidase M16 inactive domain
PF16187 Middle or third domain of peptidase_M16
PF22456 PQQ synthase PqqF-like, C-terminal lobe domain 4

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1025 Posttranslational modification, protein turnover, chaperones (O) O Secreted/periplasmic Zn-dependent peptidases, insulinase-like

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01407 protease III [EC:3.4.24.55] - -

Protein Sequence

MPKQLVQFIFTLLFFFTGANALAQNAWQVLPDEIEKSENDPRQYQAITLKNDMTVLLISDSAARKSAAAISLAIGSMDEPKSQAGLAHYLEHMVLMGSKRFPEPGNFSDYLAKHGGSHNASTGSNYTDFYFEVENSALKGATERLADALAEPLLDPVNADKERNAVNAELTMARSRDGHRMYQVRAETWNPAHPISRFSGGNLDTLKDKPGSILHEELLKFYNTYYSSNLMKGVLYGPESTEELAVLANSTFGTIPNRKASVPQITVPLITAAEQQKIIHYVPAQPQKSLDFEFVIDNNNKDFRKQTDTYIAYLLGNRSEGTLANWLISKGLAENISASASSDLARNQGIFIISVGLTDEGMLKRDEITAAVFSYLNLIKEKGISKAYFDEIARVNGLAFRYNSIVRDMGYVESLANTMMDYPVSNILNVGYLADDWDPAAIKARFSDLTPEKARIWYTSPDEPSNKKAYFVDAPYQVDNVTAAQLDKWRKSERDFHFSLPVLNPFIPDNFDLIKKEKQEKPVQLTDTAKSRLFYMPSQYFADEPKAIIALELRNKNTRRTAKDFVTSSVLSYISELKLNQLRYQAGVAGMGINISDDDGLNISADGYSQHLPELLTTAIGQYQTFTPTAAELAQAKSWYREQVAVSNNGKAYEMAMRPFSRLKYVPYFEEKDRLAALETITEKDVTEFRDRLIREGALQMFIFGNVTAPQAEQIAAKAQAQLGSQGTQWWVGDYYVIDKTLKPNFDEKANSTDNALANIFIPTGYSRTEGAAFSSVLSKILHPWFYDQLRTQEQLGYALFAFNPGFGRQWGIGFLLQSNEKNPAYLSQRFNDFYVKTEKRLQALDNAEFDKYRSALLTELTQPPETFIEEASRYSFDFKNNYFDFNTRAQTIDAVKKMTKQDVVTFYDKAVMSKNGLALYSQVTGTSGKADDYAKPEGWTTYPSVTEFQSLLPVKEEIR

Flanking regions ( +/- flanking 50bp)

ATTATTTTTGCCGATGTTCCATCATCAGAAAAACAGGGAGAATCAGGCTGATGCCTAAACAACTAGTGCAGTTTATCTTTACACTGCTTTTCTTTTTTACCGGCGCGAACGCACTTGCACAGAATGCATGGCAGGTTTTACCGGATGAGATAGAGAAAAGTGAGAATGACCCGCGTCAGTATCAGGCAATTACCCTGAAAAATGACATGACTGTTTTGCTGATTTCAGACAGTGCTGCCCGTAAATCGGCGGCAGCAATCAGCCTGGCGATAGGCAGTATGGATGAGCCGAAGAGCCAGGCAGGACTGGCGCATTATCTGGAGCACATGGTACTGATGGGATCAAAACGTTTCCCTGAACCCGGAAACTTCAGTGATTATCTTGCCAAACATGGCGGAAGCCATAATGCCAGTACGGGGTCAAATTACACTGACTTTTATTTTGAAGTTGAAAACAGTGCACTGAAAGGTGCTACCGAGCGCCTGGCTGATGCTCTGGCTGAGCCGCTGCTTGATCCGGTGAATGCAGATAAAGAGCGGAATGCGGTTAATGCAGAACTGACAATGGCGCGCTCCCGCGACGGGCACCGTATGTATCAGGTGCGGGCTGAAACCTGGAACCCCGCGCACCCGATCTCCCGTTTCTCCGGTGGTAATCTGGATACACTGAAAGATAAACCGGGCAGTATCCTGCATGAAGAATTACTCAAATTCTACAACACATACTATTCATCCAACCTGATGAAAGGTGTGCTGTACGGACCGGAATCCACAGAAGAGCTGGCTGTTCTTGCAAACAGTACATTCGGGACTATCCCGAACCGTAAGGCGTCAGTTCCGCAGATTACGGTGCCGCTTATTACCGCAGCCGAGCAACAAAAAATTATTCACTATGTTCCGGCTCAGCCTCAGAAATCTCTGGATTTTGAATTTGTCATTGACAATAACAACAAAGATTTCCGTAAACAAACAGATACTTACATCGCTTATTTGCTGGGTAACCGCAGTGAAGGGACATTAGCAAACTGGCTGATATCAAAAGGGTTAGCTGAGAATATCAGTGCATCTGCCTCTTCAGATCTGGCGCGGAATCAGGGTATTTTTATTATCTCTGTAGGGCTCACAGATGAAGGCATGTTAAAGCGTGATGAAATCACAGCCGCTGTATTTTCCTATCTGAACCTGATTAAAGAAAAAGGGATCAGTAAAGCCTATTTCGATGAGATAGCCCGGGTAAACGGACTGGCATTCCGTTACAACTCCATTGTCCGTGATATGGGCTATGTCGAGTCTCTGGCGAATACCATGATGGATTATCCGGTCAGTAATATCCTGAACGTCGGCTATCTCGCTGATGACTGGGATCCGGCTGCGATTAAAGCGCGGTTCAGTGATTTAACACCGGAAAAAGCCCGTATCTGGTACACCAGCCCGGATGAACCAAGCAATAAGAAAGCCTATTTTGTGGATGCGCCGTATCAGGTGGATAATGTAACCGCTGCGCAACTCGATAAATGGCGTAAGTCTGAACGTGATTTTCATTTCTCTCTGCCGGTATTGAACCCGTTCATTCCGGACAACTTTGATTTGATCAAAAAAGAGAAACAGGAAAAACCGGTACAACTGACAGATACAGCAAAATCACGTCTGTTCTACATGCCGAGCCAGTATTTTGCTGATGAACCGAAAGCGATTATTGCACTGGAACTGCGTAACAAAAATACCAGACGAACTGCGAAAGATTTCGTCACCAGCTCTGTGCTCAGCTATATCAGTGAACTGAAACTGAACCAGCTTCGTTATCAGGCCGGTGTGGCGGGAATGGGGATTAACATCAGTGATGATGATGGTCTGAATATCAGTGCGGATGGTTATTCTCAGCACTTACCTGAGCTTCTGACTACCGCAATCGGGCAGTATCAGACCTTTACACCGACAGCCGCTGAACTGGCGCAGGCAAAATCCTGGTATCGTGAGCAGGTCGCTGTCTCAAATAACGGCAAAGCGTATGAAATGGCAATGCGCCCGTTCAGCCGCCTGAAATATGTGCCGTATTTTGAGGAAAAAGATCGCCTCGCCGCACTTGAAACTATTACAGAAAAAGATGTGACTGAATTCCGTGATCGATTGATCCGTGAAGGTGCGTTACAGATGTTTATTTTTGGTAACGTTACAGCACCTCAGGCAGAACAGATTGCTGCGAAAGCACAGGCACAGCTTGGCTCGCAGGGAACGCAATGGTGGGTGGGTGATTACTATGTTATCGACAAAACCCTGAAACCGAATTTTGATGAGAAAGCGAACAGCACAGACAATGCGCTGGCAAATATCTTTATCCCGACAGGATATTCGCGCACTGAAGGCGCGGCTTTTTCTTCAGTATTATCAAAAATCCTGCACCCGTGGTTCTATGATCAGCTGAGGACACAGGAACAACTGGGTTATGCCCTGTTTGCCTTTAATCCGGGCTTTGGTCGTCAGTGGGGAATCGGTTTTCTGTTACAGAGCAATGAAAAAAATCCGGCGTATCTGTCACAGCGTTTTAATGATTTCTATGTGAAAACAGAAAAACGGTTACAGGCGCTGGACAATGCGGAGTTTGATAAATACCGCAGTGCTCTGCTGACTGAACTGACCCAGCCACCGGAAACCTTTATAGAAGAAGCATCCCGTTATTCGTTTGATTTCAAAAATAACTATTTTGACTTTAATACCCGCGCACAGACTATTGATGCGGTGAAAAAAATGACAAAACAGGATGTGGTGACATTCTATGATAAAGCGGTTATGTCGAAAAACGGACTGGCACTTTATTCTCAGGTAACAGGAACCAGCGGTAAAGCGGATGATTATGCGAAGCCGGAAGGCTGGACAACCTATCCGTCAGTGACAGAGTTTCAGTCACTGCTACCTGTGAAAGAGGAAATCCGGTAAGTCTATGGCGGCTGAATCTTTAAATCCGGTCACAATACCGCTGCAGGGGC