Homologs in group_1086

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06175 FBDBKF_06175 66.1 Morganella morganii S1 - DUF2509 domain-containing protein
EHELCC_09220 EHELCC_09220 66.1 Morganella morganii S2 - DUF2509 domain-containing protein
NLDBIP_09600 NLDBIP_09600 66.1 Morganella morganii S4 - DUF2509 domain-containing protein
LHKJJB_08155 LHKJJB_08155 66.1 Morganella morganii S3 - DUF2509 domain-containing protein
HKOGLL_07705 HKOGLL_07705 66.1 Morganella morganii S5 - DUF2509 domain-containing protein
PMI_RS11440 PMI_RS11440 32.0 Proteus mirabilis HI4320 - DUF2509 family protein

Distribution of the homologs in the orthogroup group_1086

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1086

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15740
Feature type CDS
Gene -
Product YgdB family protein
Location 149833 - 150348 (strand: 1)
Length 516 (nucleotides) / 171 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1086
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10713 Protein of unknown function (DUF2509)

Protein Sequence

MQHPIIIRNSVGRREKTMQGSALMMMIMLLLGIALMLLSVLHRFYQTEWRNGQDEIAFYQADAGAASALAWGMTLRWSRSEFVREPLYCRTAADPALKSCLRRLKENRFLLQGSSFSPWFRQNISHYQLVTATVQGNEMTLTALAQGWSDFCPPDLKPDCGGHSETGGQNE

Flanking regions ( +/- flanking 50bp)

ACTGGCCGGCAAAGAAAAACCGGTGCTGCAACGAACCGGAGAAAGCCTGATTGCAACACCCAATTATCATCCGTAACAGTGTGGGTCGGCGCGAAAAAACAATGCAGGGCAGTGCGCTGATGATGATGATCATGCTTCTGCTGGGTATCGCCCTGATGTTGTTATCCGTCCTGCACCGGTTTTACCAGACTGAGTGGCGCAACGGACAGGATGAAATTGCCTTTTATCAGGCGGATGCCGGTGCGGCGTCCGCACTGGCGTGGGGAATGACACTACGCTGGTCCCGGAGTGAGTTTGTCAGAGAGCCGTTGTACTGCCGGACAGCGGCAGACCCGGCACTGAAGAGTTGTCTCCGGCGGCTGAAGGAAAATCGTTTTTTATTGCAGGGAAGTTCATTTTCGCCCTGGTTCAGACAAAATATATCTCATTATCAGCTTGTTACCGCAACAGTGCAGGGTAATGAAATGACACTGACAGCGCTGGCACAGGGATGGAGTGACTTTTGCCCTCCGGATCTTAAACCGGATTGTGGCGGGCACAGTGAGACAGGAGGACAAAATGAATGAGCGGGGTATGTCGTTACCGGAAGTGCTTATCTGTGCCTTTGTTTTTGCGG