Homologs in group_2703

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06475 FBDBKF_06475 83.9 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_09520 EHELCC_09520 83.9 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_09900 NLDBIP_09900 83.9 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_07855 LHKJJB_07855 83.9 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_07405 HKOGLL_07405 83.9 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily

Distribution of the homologs in the orthogroup group_2703

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2703

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15450
Feature type CDS
Gene -
Product DMT family transporter
Location 78269 - 79111 (strand: -1)
Length 843 (nucleotides) / 280 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2703
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0697 Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 GER Permease of the drug/metabolite transporter (DMT) superfamily

Protein Sequence

MSVTLFIAVLFAAFFHASWNAVIKFGQDRFLGIAVMTIYSGLVSVPVLFLIGLPDAAALKWLALSALFHIGYAVCLSRAYARGDLSQIYPVSRGCAPLLTTLFAVTLFGEHLAWLSFAGIMLIVSGVILLAFNRRSPSHARAGLVYAIITAFFTACYTLSDGFGARSSSDPLTYIFWLFALNGLVMLILGFARYRHNFTRNFLRYSKPGLTGGILQIFSYGIVIWAMGQASIMLVASLRETSVLFALLLSAFFLKERLTQARIVAACIIVAGVIVTKLGS

Flanking regions ( +/- flanking 50bp)

TGATATTTTAGTATCAAATTGCTCCTACTCTGAATAAAACAGGTTATTTTATGTCCGTCACGCTGTTTATTGCCGTTCTGTTTGCCGCTTTTTTCCACGCAAGCTGGAATGCAGTTATAAAATTTGGTCAGGACAGGTTTCTCGGCATCGCCGTCATGACGATTTATTCAGGTCTGGTGTCTGTTCCCGTGCTGTTCCTGATCGGGTTACCTGACGCCGCCGCGCTGAAGTGGCTGGCGCTCTCCGCGCTGTTTCATATCGGTTATGCAGTCTGCCTGAGCCGGGCTTATGCGCGCGGGGATCTCAGCCAGATTTACCCTGTCTCGCGCGGGTGTGCGCCTTTACTGACCACCCTTTTTGCTGTCACTCTATTTGGTGAACATCTGGCATGGCTCTCATTCGCCGGTATTATGCTGATTGTATCTGGTGTTATTCTGCTTGCTTTCAACCGCCGCTCACCGTCACATGCCCGCGCAGGGCTGGTTTATGCCATTATCACGGCTTTTTTTACCGCCTGTTATACGCTTTCCGATGGTTTCGGGGCGCGCAGCAGTTCAGACCCCCTGACCTATATTTTCTGGCTGTTTGCATTAAACGGGCTGGTGATGCTGATATTAGGGTTTGCCCGCTACCGGCATAATTTTACACGGAATTTTTTGCGCTACAGTAAGCCCGGGCTTACCGGCGGCATATTGCAGATATTCAGTTACGGCATTGTAATTTGGGCAATGGGGCAGGCTTCCATTATGCTTGTCGCCTCATTGCGGGAAACCAGTGTACTGTTTGCCTTGCTGCTCTCCGCCTTTTTCCTGAAAGAACGGCTGACACAGGCGCGGATAGTTGCCGCCTGTATCATTGTGGCGGGAGTTATTGTGACAAAGCTGGGAAGCTAGCGCTCACTCTCCTGTGATTGCAGGTGACTGCGCAATACTATTCATTTTGT