Homologs in group_2308

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17725 FBDBKF_17725 74.7 Morganella morganii S1 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
EHELCC_09750 EHELCC_09750 74.7 Morganella morganii S2 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
NLDBIP_10130 NLDBIP_10130 74.7 Morganella morganii S4 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
LHKJJB_07625 LHKJJB_07625 74.7 Morganella morganii S3 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
HKOGLL_07175 HKOGLL_07175 74.7 Morganella morganii S5 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
PMI_RS18445 PMI_RS18445 45.1 Proteus mirabilis HI4320 - FecR domain-containing protein

Distribution of the homologs in the orthogroup group_2308

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2308

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23485 3.8e-12 69 23 5 298 1 fecR Ferric citrate uptake sigma factor regulator FecR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15235
Feature type CDS
Gene -
Product FecR domain-containing protein
Location 32697 - 33662 (strand: -1)
Length 966 (nucleotides) / 321 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2308
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04773 FecR protein
PF16220 Domain of unknown function (DUF4880)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3712 Inorganic ion transport and metabolism (P)
Signal transduction mechanisms (T)		 PT Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07165 transmembrane sensor Two-component system -

Protein Sequence

MADTAQEQDERDDAAALWFTRWHSQSMNAHQQNELRSWLAASPENQQAFDEMAQMWSDMSSLPRPSVPAPKPARTFSVLRPLRHTLAGFFILIMLFLPYSQLPALLMDNLTLATTSDSKSMILPDGSRIFLNRDSEADIAYEQTHRRITLVRGNAFFQVKPNPWRPFIIQADGREITVVGTEFDVRKQGTEITVSVARGIVALRDAAEDTPVYLKAGDEAVSAAAGRKPVISHIPPEQSGEWRNGQISLTDTPLRDVVSRLAPYHNRTISLAANAADLRVSGRVNIDDAESFFTALPQVLPVSVAEQPNGTLLIIKKNKNK

Flanking regions ( +/- flanking 50bp)

CTGCTGCAATGCAAGCGTGCCATGAACGCCGGAGAACAGAAGGACGGATAATGGCAGATACCGCGCAGGAGCAGGACGAACGGGATGATGCCGCCGCGCTGTGGTTCACGCGCTGGCACAGTCAGAGCATGAACGCGCATCAGCAAAATGAGCTGCGCTCATGGCTGGCGGCATCCCCGGAAAATCAGCAGGCGTTTGATGAAATGGCGCAGATGTGGAGTGATATGTCCTCTCTGCCGCGCCCGTCCGTTCCCGCACCAAAGCCTGCCCGCACCTTTTCCGTTTTGCGCCCGCTGCGTCACACCCTTGCCGGTTTTTTTATCCTGATCATGCTGTTTCTGCCTTACAGCCAGTTACCTGCGCTGCTGATGGATAACCTGACACTCGCCACCACATCAGACAGTAAATCCATGATATTACCGGATGGCAGCCGGATCTTTCTCAACCGTGACAGTGAGGCCGATATTGCTTATGAGCAGACACACCGGCGCATCACACTTGTCCGTGGCAATGCTTTTTTTCAGGTAAAACCCAATCCGTGGCGGCCATTCATTATTCAGGCGGACGGGCGGGAGATAACCGTTGTCGGCACCGAATTTGATGTCCGCAAACAGGGCACTGAAATCACCGTATCCGTTGCCCGCGGCATTGTTGCTCTGCGCGATGCCGCAGAAGACACCCCGGTTTATCTGAAAGCCGGTGATGAAGCGGTCAGTGCGGCTGCCGGGCGTAAACCGGTCATTAGCCATATTCCGCCGGAGCAGTCCGGAGAATGGCGTAACGGGCAAATCAGCCTGACAGACACCCCTCTTCGCGACGTGGTTTCCCGCCTCGCGCCTTATCACAACCGCACCATTTCACTTGCTGCGAATGCCGCAGACCTGCGCGTCTCCGGGCGGGTCAATATTGACGATGCCGAATCCTTTTTTACTGCCCTGCCGCAGGTTCTGCCTGTTAGTGTGGCAGAACAGCCAAATGGCACCCTGTTGATTATTAAGAAAAATAAAAATAAATGAAAAAAAGAACGATTCGCAGGTGAGGATAGTTATCATTTCCGCGTCTTCTG