Homologs in group_2324

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17855 FBDBKF_17855 85.0 Morganella morganii S1 - Uncharacterized membrane protein
EHELCC_09880 EHELCC_09880 85.0 Morganella morganii S2 - Uncharacterized membrane protein
NLDBIP_10260 NLDBIP_10260 85.0 Morganella morganii S4 - Uncharacterized membrane protein
LHKJJB_07495 LHKJJB_07495 85.0 Morganella morganii S3 - Uncharacterized membrane protein
HKOGLL_07045 HKOGLL_07045 85.0 Morganella morganii S5 - Uncharacterized membrane protein
PMI_RS17740 PMI_RS17740 71.2 Proteus mirabilis HI4320 - PACE efflux transporter

Distribution of the homologs in the orthogroup group_2324

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2324

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6FAW0 8.64e-25 95 39 1 127 2 aceI Short-chain diamines transporter Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P0DUT9 1.3e-20 85 33 1 127 1 aceI Short-chain diamines transporter Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Q87QJ4 2.33e-13 66 32 1 105 3 VP1155 Short-chain diamines transporter Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15110
Feature type CDS
Gene -
Product PACE efflux transporter
Location 3710 - 4153 (strand: -1)
Length 444 (nucleotides) / 147 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2324
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05232 Chlorhexidine efflux transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4125 Function unknown (S) S Uncharacterized membrane protein

Protein Sequence

MQGLKRKMVFIAAYEVIGWIISSLGLALLSGNSAGVTGPLALVITTIAVSWNFIFNSLFEYWESRQISRTRTLRRRLVHAVLFQLTLVVFLIPLIAWWLSVSLLQAFLLDFALIIFIPIYTFFFNWAFDKIFGVPDSARPRQEKILH

Flanking regions ( +/- flanking 50bp)

TTTAATTTGCTTCCCGGTTCACACAGCAAAAGAAACAGGACACAAAAAGTATGCAGGGTTTAAAACGGAAAATGGTCTTTATTGCCGCCTATGAAGTGATTGGCTGGATAATTTCATCTCTGGGACTGGCGCTGCTCTCCGGTAATTCAGCAGGTGTTACCGGCCCGCTGGCACTGGTTATTACCACTATCGCAGTGAGCTGGAATTTTATTTTTAACAGCCTGTTTGAATATTGGGAATCACGTCAGATATCGCGTACGCGGACATTGCGCCGCAGGCTGGTACACGCTGTATTATTTCAGCTGACACTCGTGGTATTTCTTATTCCGTTAATTGCGTGGTGGTTATCCGTCAGTTTATTACAGGCATTCTTACTGGATTTCGCATTAATTATTTTTATTCCGATCTATACCTTTTTCTTCAATTGGGCATTTGACAAAATATTTGGTGTGCCGGATTCAGCCCGTCCACGGCAGGAAAAAATTCTTCACTGATGCAATAACCAAAAAAGCCATACCAAAAACGGTATGGCAAAATTTAGCAT