Homologs in group_3683

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3 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
NLDBIP_15650 NLDBIP_15650 89.6 Morganella morganii S4 tusB Sulfur transfer complex TusBCD TusB component, DsrH family
HKOGLL_19325 HKOGLL_19325 89.6 Morganella morganii S5 tusB Sulfur transfer complex TusBCD TusB component, DsrH family
PMI_RS13810 PMI_RS13810 38.5 Proteus mirabilis HI4320 tusB sulfurtransferase complex subunit TusB

Distribution of the homologs in the orthogroup group_3683

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3683

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N9B5 4.85e-26 95 49 0 95 3 tusB Protein TusB Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B1JIV2 1.37e-22 86 46 0 95 3 tusB Protein TusB Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q664R3 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TGY3 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pestis (strain Pestoides F)
Q1CCT5 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pestis bv. Antiqua (strain Nepal516)
A9R465 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pestis bv. Antiqua (strain Angola)
Q8ZJB6 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pestis
B2K5N8 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C2T7 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pestis bv. Antiqua (strain Antiqua)
A7FNP2 4.05e-22 85 46 0 95 3 tusB Protein TusB Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B2VK39 3.68e-21 82 43 0 95 3 tusB Protein TusB Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A7MKJ0 7.74e-21 82 41 0 95 3 tusB Protein TusB Cronobacter sakazakii (strain ATCC BAA-894)
Q5XWD9 2.14e-19 78 41 0 95 3 tusB Protein TusB Pectobacterium parmentieri
A1JS58 4.35e-19 77 42 0 95 3 tusB Protein TusB Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q89A64 1.27e-17 73 37 0 95 3 tusB Protein TusB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q6CZW2 1.57e-17 73 40 0 95 3 tusB Protein TusB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
B7LS49 2.14e-17 73 43 0 95 3 tusB Protein TusB Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q32B23 2.16e-17 73 42 0 95 3 tusB Protein TusB Shigella dysenteriae serotype 1 (strain Sd197)
P45530 3.45e-17 72 42 0 95 1 tusB Protein TusB Escherichia coli (strain K12)
B1X6J2 3.45e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli (strain K12 / DH10B)
C4ZUJ8 3.45e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli (strain K12 / MC4100 / BW2952)
Q0TCB6 3.49e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N0X9 3.49e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O81 (strain ED1a)
A8GKK5 4.29e-17 72 38 0 95 3 tusB Protein TusB Serratia proteamaculans (strain 568)
Q1R5U0 5.64e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli (strain UTI89 / UPEC)
Q8FCY3 5.64e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1AGN0 5.64e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O1:K1 / APEC
B7MCV8 5.64e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O45:K1 (strain S88 / ExPEC)
P0C1C4 6.42e-17 72 42 0 95 3 tusB Protein TusB Shigella boydii serotype 4 (strain Sb227)
B2U2V0 6.42e-17 72 42 0 95 3 tusB Protein TusB Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I243 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli (strain SE11)
B7NDV1 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
A8A5F0 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O9:H4 (strain HS)
B7M1P4 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O8 (strain IAI1)
B7NLP8 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7L4L8 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli (strain 55989 / EAEC)
B7UK53 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZSL8 6.42e-17 72 42 0 95 3 tusB Protein TusB Escherichia coli O139:H28 (strain E24377A / ETEC)
B5YTQ0 1.08e-16 71 42 0 95 3 tusB Protein TusB Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X885 1.08e-16 71 42 0 95 3 tusB Protein TusB Escherichia coli O157:H7
B1IPV6 1.57e-16 71 41 0 95 3 tusB Protein TusB Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q2NQL3 1.91e-16 70 41 0 95 3 tusB Protein TusB Sodalis glossinidius (strain morsitans)
B1LHE3 2.8e-16 70 41 0 95 3 tusB Protein TusB Escherichia coli (strain SMS-3-5 / SECEC)
Q3YWS9 3.02e-16 70 41 0 95 3 tusB Protein TusB Shigella sonnei (strain Ss046)
Q83JC2 7.37e-16 69 41 0 95 3 tusB Protein TusB Shigella flexneri
Q0SZX4 7.37e-16 69 41 0 95 3 tusB Protein TusB Shigella flexneri serotype 5b (strain 8401)
C6DG83 1.08e-15 68 38 0 95 3 tusB Protein TusB Pectobacterium carotovorum subsp. carotovorum (strain PC1)
A4WFD6 1.26e-15 68 33 0 95 3 tusB Protein TusB Enterobacter sp. (strain 638)
B8D855 1.69e-15 68 33 0 95 3 tusB Protein TusB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)
P57596 1.69e-15 68 33 0 95 3 tusB Protein TusB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
B8D9V3 1.69e-15 68 33 0 95 3 tusB Protein TusB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)
A6TEY1 4.49e-15 67 38 2 96 3 tusB Protein TusB Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XN84 1.44e-14 66 38 2 96 3 tusB Protein TusB Klebsiella pneumoniae (strain 342)
Q8K946 2.92e-12 60 33 0 95 3 tusB Protein TusB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
B5RH06 1.55e-11 58 35 0 95 3 tusB Protein TusB Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R2A0 1.55e-11 58 35 0 95 3 tusB Protein TusB Salmonella enteritidis PT4 (strain P125109)
B5FJM3 1.55e-11 58 35 0 95 3 tusB Protein TusB Salmonella dublin (strain CT_02021853)
Q8ZLL9 2.17e-11 58 35 0 95 3 tusB Protein TusB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4SUU9 2.17e-11 58 35 0 95 3 tusB Protein TusB Salmonella newport (strain SL254)
B4TKM4 2.17e-11 58 35 0 95 3 tusB Protein TusB Salmonella heidelberg (strain SL476)
Q57J23 2.17e-11 58 35 0 95 3 tusB Protein TusB Salmonella choleraesuis (strain SC-B67)
A9MN36 2.17e-11 58 35 0 95 3 tusB Protein TusB Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q8Z1Y1 3.18e-11 57 35 0 95 3 tusB Protein TusB Salmonella typhi
B4TXF1 3.18e-11 57 35 0 95 3 tusB Protein TusB Salmonella schwarzengrund (strain CVM19633)
B5BGZ5 3.18e-11 57 35 0 95 3 tusB Protein TusB Salmonella paratyphi A (strain AKU_12601)
A9MT08 3.18e-11 57 35 0 95 3 tusB Protein TusB Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PIW0 3.18e-11 57 35 0 95 3 tusB Protein TusB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5F8G1 3.18e-11 57 35 0 95 3 tusB Protein TusB Salmonella agona (strain SL483)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14905
Feature type CDS
Gene tusB
Product sulfurtransferase complex subunit TusB
Location 214477 - 214767 (strand: 1)
Length 291 (nucleotides) / 96 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3683
Orthogroup size 4
N. genomes 4

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Genomic region

Domains

PF04077 DsrH like protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2168 Translation, ribosomal structure and biogenesis (J) J Sulfur transfer complex TusBCD TusB component, DsrH family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07237 tRNA 2-thiouridine synthesizing protein B Sulfur relay system -

Protein Sequence

MLYTVSQSPFRTDIQSLLNLLSSEDDILFTEDGVIAATNENPLLLALIQSGHIPCVLREDAQARGLLPYLSGKVKIIDYNGFIELTVTHTQHFAWE

Flanking regions ( +/- flanking 50bp)

GGCGACATTCGATATCGTTCTGTCATTTTGATCTACTTACGGTGAGCAAGATGCTATATACTGTCAGCCAATCGCCATTTCGTACTGATATTCAATCATTACTGAATTTGTTGTCCTCTGAGGATGACATCCTGTTTACCGAAGATGGCGTAATAGCAGCAACGAACGAAAACCCGTTGTTGCTGGCGCTTATTCAGTCGGGTCATATTCCCTGTGTGTTGCGGGAGGATGCGCAAGCACGCGGTTTACTACCGTACCTCTCCGGCAAAGTAAAAATCATAGACTATAATGGTTTTATTGAACTTACTGTCACACACACGCAGCATTTTGCGTGGGAATAGCAAATATCATTGTATATTTCTTGACACCCTGTTGCGTCAGCAATAAAATT