Homologs in group_4168

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4168

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4168

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14835
Feature type CDS
Gene -
Product type II toxin-antitoxin system HicB family antitoxin
Location 201864 - 202217 (strand: 1)
Length 354 (nucleotides) / 117 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4168
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF05534 HicB family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4226 General function prediction only (R) R Predicted nuclease of the RNAse H fold, HicB family

Protein Sequence

MIKNTNIMTIDGHPASVTYEDEIKAFRGKFLDINGYCDFISDSIDGLEREGAISLAEFTETCKEEGIQPFKDEDKLKAFTLRYPYRLEARLNAATAAHSVSKNQFIVQLLERELVSR

Flanking regions ( +/- flanking 50bp)

AGTTGATGTCATTAAATGACATCAACCGGATGCGTGTATAGGGGTGGAGCATGATTAAAAACACAAATATCATGACTATTGACGGTCATCCTGCATCAGTGACTTATGAAGATGAAATTAAAGCATTTCGCGGTAAATTTCTGGATATAAACGGATATTGTGATTTTATATCAGACAGTATTGACGGGCTTGAAAGAGAAGGTGCCATTTCACTGGCTGAATTTACAGAAACATGCAAAGAAGAAGGTATTCAGCCTTTTAAAGACGAGGATAAATTAAAAGCATTTACACTGCGTTATCCTTACCGGCTGGAAGCGCGTCTGAATGCAGCCACAGCGGCACATTCTGTATCAAAGAATCAGTTTATTGTTCAGTTGCTGGAGCGGGAACTGGTATCCCGCTGATTTTAGGCAAAAACTGTTTATCCTGTGATGTCCGTAGTAAAAACAGACCG