Homologs in group_44

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05110 FBDBKF_05110 46.0 Morganella morganii S1 cysB HTH-type transcriptional regulator CysB
FBDBKF_10650 FBDBKF_10650 94.5 Morganella morganii S1 cysB DNA-binding transcriptional regulator, LysR family
EHELCC_12480 EHELCC_12480 46.0 Morganella morganii S2 cysB HTH-type transcriptional regulator CysB
EHELCC_14985 EHELCC_14985 94.5 Morganella morganii S2 cysB DNA-binding transcriptional regulator, LysR family
NLDBIP_12820 NLDBIP_12820 46.0 Morganella morganii S4 cysB HTH-type transcriptional regulator CysB
NLDBIP_14815 NLDBIP_14815 94.5 Morganella morganii S4 cysB DNA-binding transcriptional regulator, LysR family
LHKJJB_12680 LHKJJB_12680 46.0 Morganella morganii S3 cysB HTH-type transcriptional regulator CysB
LHKJJB_14530 LHKJJB_14530 94.5 Morganella morganii S3 cysB DNA-binding transcriptional regulator, LysR family
HKOGLL_11295 HKOGLL_11295 46.0 Morganella morganii S5 cysB HTH-type transcriptional regulator CysB
HKOGLL_13150 HKOGLL_13150 94.5 Morganella morganii S5 cysB DNA-binding transcriptional regulator, LysR family
F4V73_RS05565 F4V73_RS05565 46.0 Morganella psychrotolerans cysB HTH-type transcriptional regulator CysB
PMI_RS06380 PMI_RS06380 47.2 Proteus mirabilis HI4320 cysB HTH-type transcriptional regulator CysB
PMI_RS15975 PMI_RS15975 72.4 Proteus mirabilis HI4320 - LysR substrate-binding domain-containing protein

Distribution of the homologs in the orthogroup group_44

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_44

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06614 7.71e-109 322 52 1 296 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A9F3 2.19e-108 321 51 1 296 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 2.19e-108 321 51 1 296 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 2.19e-108 321 51 1 296 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P45600 1.51e-107 319 50 1 296 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P45105 3e-96 290 44 1 306 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B4E8S9 2.84e-85 262 42 1 297 1 ssuR HTH-type transcriptional regulator SsuR Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
B4E8V9 1.43e-81 253 40 1 303 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q47083 3.49e-63 206 37 4 297 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
Q08598 2.37e-59 196 35 4 313 3 cbl HTH-type transcriptional regulator cbl Klebsiella aerogenes
P52675 5.29e-28 108 41 0 136 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
A0T0G2 3.58e-23 100 27 6 288 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
P20668 1.59e-22 98 27 2 248 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P39647 2.37e-22 98 27 4 281 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
Q55459 3.84e-22 97 28 6 250 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P49518 4.07e-22 97 27 5 270 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P27111 7.24e-22 96 27 4 246 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P37499 2.65e-21 95 25 5 247 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
O32255 2.81e-21 95 25 4 256 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
Q8X4M5 1.33e-20 93 27 3 237 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P48271 7.76e-20 91 26 5 269 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P73123 1.52e-18 88 28 8 277 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P25544 1.59e-18 87 26 5 252 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
Q5N5I5 1.85e-18 87 26 6 266 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 1.85e-18 87 26 6 266 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P71318 2.66e-18 87 24 7 308 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q3MCB5 3.08e-18 87 27 7 277 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q85G62 4.41e-18 86 26 4 266 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
Q8YQ82 8.83e-18 85 27 7 277 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
O34701 8.99e-18 85 28 6 254 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
Q9X725 1.42e-17 85 25 4 255 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P39592 1.43e-17 85 23 6 299 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P94403 4.57e-17 83 26 6 250 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P94387 4.74e-17 84 25 6 259 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P44821 8.05e-17 82 24 5 280 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q1XDT2 1.67e-16 82 27 6 254 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
Q47141 1.68e-16 81 26 8 300 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
O78432 2.73e-16 81 26 5 272 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
O19892 3.41e-16 81 28 6 257 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P51205 3.83e-16 81 27 6 254 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
P0ACQ4 4e-16 80 24 7 286 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 4e-16 80 24 7 286 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 4e-16 80 24 7 286 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
P44876 7.11e-16 80 22 5 292 3 HI_0775 Uncharacterized HTH-type transcriptional regulator HI_0775 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O07906 8.09e-16 79 21 4 256 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
A2CI69 1.42e-15 79 24 3 263 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
Q6B936 1.69e-15 79 26 6 281 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
P96725 2.34e-15 78 26 5 244 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P52693 3.32e-15 78 25 7 264 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
A0T0V5 1.09e-14 76 25 7 295 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
Q4G384 1.11e-14 77 25 4 255 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
O33812 2.72e-14 75 25 7 258 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P0ACR4 4.16e-14 75 26 5 257 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 4.16e-14 75 26 5 257 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 4.16e-14 75 26 5 257 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
P74422 4.62e-14 75 25 3 224 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P42722 6.43e-14 74 25 6 248 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P77744 1.81e-13 73 27 2 161 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P0A2Q4 1.81e-13 73 25 10 269 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 1.81e-13 73 25 10 269 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P71025 2.35e-13 72 27 7 239 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
P05827 2.68e-13 72 24 6 256 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
O35038 4.46e-13 72 24 5 250 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
P44418 5.74e-13 71 24 4 248 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q04778 1.03e-12 70 25 6 252 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P52696 1.71e-12 70 25 4 201 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P0A2Q2 4.3e-12 68 23 6 256 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 4.3e-12 68 23 6 256 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
O32186 4.43e-12 68 23 6 295 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
O34827 6e-12 68 20 5 265 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P0A9G1 6.56e-12 68 26 9 234 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 6.56e-12 68 26 9 234 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 6.56e-12 68 26 9 234 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P94501 7.3e-12 68 23 5 264 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P03030 8.89e-12 68 24 6 277 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P77309 9.9e-12 68 24 8 254 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
O68014 1.02e-11 68 25 5 181 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P24734 1.64e-11 67 29 14 272 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52691 2.03e-11 67 29 7 207 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
A7Z5E4 6.8e-11 65 24 7 254 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q9X5P2 7.43e-11 65 27 5 186 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
O06703 7.49e-11 65 25 4 218 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P0ACR8 2.34e-10 63 22 4 257 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 2.34e-10 63 22 4 257 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
Q765S2 3.19e-10 63 24 9 244 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P77559 3.55e-10 63 26 10 253 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
P39127 5.22e-10 62 25 7 247 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P0A4T7 5.82e-10 62 29 2 148 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 5.82e-10 62 29 2 148 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P07774 1.87e-09 61 28 3 148 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P52665 2.33e-09 58 29 3 145 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q06610 2.8e-09 60 22 5 262 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P45349 3.07e-09 60 24 7 199 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q81IX0 3.38e-09 60 22 6 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q63H01 4.82e-09 60 22 6 315 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 4.82e-09 60 22 6 315 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
Q6HPH4 4.95e-09 60 22 6 315 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
O33945 5.45e-09 60 23 5 199 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
O34685 7.03e-09 59 24 6 260 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
A0R8S0 7.8e-09 59 22 6 301 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q81VJ1 9.74e-09 58 21 6 315 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
P20667 1.14e-08 58 28 8 205 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P52666 2.81e-08 57 29 5 151 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
P55181 2.9e-08 57 24 6 195 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
Q44311 3.35e-08 57 26 6 208 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
Q9JPU9 3.66e-08 57 25 9 258 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
Q47005 3.81e-08 57 25 7 259 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
Q9HWH8 4.97e-08 57 23 6 248 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A4T3 7.05e-08 56 24 5 201 1 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium radiobacter
P0A4T4 7.05e-08 56 24 5 201 1 occR Octopine catabolism/uptake operon regulatory protein OccR Agrobacterium tumefaciens (strain Ach5)
Q88JX7 8.65e-08 56 25 7 251 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P52669 1e-07 56 21 4 250 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P23841 1.35e-07 55 21 4 247 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
P70785 1.46e-07 55 24 2 195 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q00678 1.95e-07 55 24 8 255 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
P35112 2.28e-07 55 24 8 255 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
Q9S4Y7 2.31e-07 55 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 2.31e-07 55 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P34818 2.32e-07 55 25 7 144 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
Q1RF30 2.35e-07 55 23 10 272 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 2.35e-07 55 23 10 272 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
Q8FK66 2.53e-07 55 23 10 272 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 2.53e-07 55 23 10 272 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q57S50 2.77e-07 55 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
P0ACR0 3.21e-07 54 22 8 269 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 3.21e-07 54 22 8 269 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P30864 3.29e-07 54 34 4 123 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P52677 3.34e-07 54 24 3 183 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
Q8Z8R3 4.41e-07 54 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella typhi
P72294 4.94e-07 53 22 8 272 3 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium meliloti
Q9JXW7 7.12e-07 53 25 10 262 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q57748 9.06e-07 53 22 5 287 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A4QH19 1.31e-06 52 22 8 285 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
P96194 1.51e-06 50 28 2 101 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P52667 1.77e-06 52 23 1 140 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P25545 2e-06 52 22 7 270 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
P52595 2.1e-06 52 20 8 310 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P52658 4.01e-06 51 28 8 170 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P0ACQ9 4.32e-06 51 25 3 158 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 4.32e-06 51 25 3 158 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 4.32e-06 51 25 3 158 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P42427 4.6e-06 50 25 5 170 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q05840 6.6e-06 50 23 10 298 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P0A9F6 6.92e-06 50 30 7 147 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 6.92e-06 50 30 7 147 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 6.92e-06 50 30 7 147 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
A0A0H2ZDG9 7.24e-06 50 28 2 125 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
A1JI47 8.56e-06 50 27 4 161 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P52690 9.26e-06 50 22 11 288 3 cbbR HTH-type transcriptional regulator CbbR Cereibacter sphaeroides
O87883 1.12e-05 48 23 3 183 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
P10183 1.79e-05 49 22 6 212 3 nahR HTH-type transcriptional activator NahR Pseudomonas putida
P77171 1.89e-05 49 24 5 212 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P45099 2.08e-05 49 29 5 145 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q08597 2.64e-05 48 25 5 152 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
B7LUJ5 3.23e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B1JQ39 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 3.69e-05 48 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q1R4H3 3.7e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 3.7e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 3.7e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 3.7e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 3.7e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
Q3YVK2 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q329U3 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
Q31UM0 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
B6I4A0 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
P0A8R9 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7M5B2 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
B7UMM1 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZTW7 3.73e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
B7NF72 3.84e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7NU32 3.84e-05 48 33 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q46M57 4.04e-05 48 26 5 152 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P56885 4.27e-05 48 24 11 264 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)
Q46M54 4.38e-05 48 26 5 152 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P16931 4.44e-05 48 25 3 147 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
O87324 4.52e-05 48 23 3 178 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
B2TU26 5.18e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B4SYF7 7.76e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
B5FN59 7.76e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
B4TNR5 8.19e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
P45463 8.25e-05 47 26 2 121 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
P33634 8.26e-05 47 26 3 122 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
Q1R6S1 8.32e-05 47 26 2 121 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 8.32e-05 47 26 2 121 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A2Q0 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 8.5e-05 47 40 2 66 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
P94678 8.5e-05 47 22 3 186 1 tsaR HTH-type transcriptional regulator TsaR Comamonas testosteroni
Q0TD46 9.19e-05 47 26 2 121 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q9EXL7 0.000122 46 25 4 152 3 nagR HTH-type transcriptional activator NagR Ralstonia sp.
P55733 0.000132 47 26 8 178 3 syrM2 HTH-type transcriptional regulator SyrM 2 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P52660 0.000223 45 27 9 185 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P52684 0.000272 45 20 3 228 3 mauR Malonate utilization transcriptional regulator Klebsiella pneumoniae
P0DUU5 0.000379 45 22 6 197 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P67662 0.000476 45 24 4 151 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 0.000476 45 24 4 151 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 0.000476 45 24 4 151 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P52678 0.000578 44 22 3 183 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P76250 0.001 43 26 4 149 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14360
Feature type CDS
Gene -
Product LysR substrate-binding domain-containing protein
Location 98241 - 99218 (strand: 1)
Length 978 (nucleotides) / 325 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_44
Orthogroup size 14
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MNINQLKSFVEVVRSDFNITNAAEKLYTSQPTVSKQLKILEDELNVSLFNRKNNNLLSLSPIGEEVHRVACDILAQFDKIKSLVSNEDSTIKQNLRIATTHTQIRYKLPKVIERFNARYPNISLHFHQGAPAQLAEMVKNGDVDFAIATESLHLYDDLLTLPCYQWSRSAIVPHDHPLAQHEQLTIEELATYPLITYVFGFTGRSKLDQVFYQNRLTPNVVLTAVDTEIIKFYVKRGAGVGVISSVAFDSQEDSETLRCINIGNLVKPSYTHICISRHTHLKDYMYDFISCYAPHLDLNYIHQPEQWLPAGQSERDVLYRALPEL

Flanking regions ( +/- flanking 50bp)

ATTAATAATTTTAATATTTTTAATCCGTTTTATAACTGGATAAATAAGCAATGAACATTAATCAGCTCAAAAGTTTTGTTGAGGTGGTCAGAAGTGATTTTAATATCACAAATGCTGCCGAAAAACTGTATACATCGCAGCCAACGGTGAGCAAGCAGCTTAAAATTCTTGAAGATGAACTGAACGTTTCTTTATTCAACCGGAAAAATAATAACTTATTATCACTCAGTCCGATTGGTGAAGAAGTTCATCGCGTTGCCTGCGACATTCTTGCGCAGTTTGATAAAATTAAAAGCCTGGTATCTAACGAAGACAGCACAATAAAACAGAATCTCCGTATTGCCACGACTCATACTCAGATCCGCTATAAATTACCGAAAGTCATTGAACGCTTTAATGCCCGTTATCCGAACATTTCCCTGCATTTTCATCAGGGAGCGCCTGCGCAGCTCGCTGAGATGGTTAAGAACGGAGATGTGGATTTCGCTATCGCAACAGAGTCATTGCACCTGTATGACGATTTACTGACCCTGCCGTGCTATCAGTGGTCACGCAGTGCTATTGTGCCGCATGACCACCCATTGGCGCAGCATGAGCAACTGACGATTGAAGAGCTGGCGACTTATCCGCTGATAACCTATGTCTTCGGATTTACCGGGCGCTCCAAGCTGGATCAGGTCTTTTATCAAAACCGCCTGACACCCAATGTGGTATTAACAGCCGTCGATACTGAGATTATTAAATTTTATGTAAAACGGGGAGCGGGTGTGGGTGTTATTTCATCTGTGGCGTTTGATTCACAGGAAGACAGTGAAACACTGCGTTGTATAAATATCGGAAACCTGGTAAAACCAAGCTATACCCATATCTGTATCAGCCGTCACACGCATCTGAAAGATTATATGTATGACTTTATTTCCTGTTATGCCCCGCATCTTGACCTGAATTATATTCATCAGCCGGAACAGTGGTTACCTGCCGGGCAAAGTGAGAGGGATGTGCTTTACCGCGCATTACCCGAGCTCTGATATACCCTTATTCATTCAAACTGCAGGTGCGTTGGCTACGCTCAGCTAAC