Homologs in group_2847

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10595 FBDBKF_10595 94.0 Morganella morganii S1 atoD acetate CoA-transferase subunit alpha
EHELCC_14930 EHELCC_14930 94.0 Morganella morganii S2 atoD acetate CoA-transferase subunit alpha
NLDBIP_14760 NLDBIP_14760 94.0 Morganella morganii S4 atoD acetate CoA-transferase subunit alpha
LHKJJB_14585 LHKJJB_14585 94.0 Morganella morganii S3 atoD acetate CoA-transferase subunit alpha
HKOGLL_13205 HKOGLL_13205 94.0 Morganella morganii S5 atoD acetate CoA-transferase subunit alpha

Distribution of the homologs in the orthogroup group_2847

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2847

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76458 5.99e-121 345 76 0 216 1 atoD Acetate CoA-transferase subunit alpha Escherichia coli (strain K12)
P44875 5e-95 279 65 0 214 3 atoD Acetate CoA-transferase subunit alpha Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P33752 6.39e-77 233 49 0 216 1 ctfA Acetoacetyl-CoA:acetate/butyrate CoA transferase alpha subunit Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
P42315 2.32e-67 209 48 0 207 1 scoA Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Bacillus subtilis (strain 168)
B0RVK4 6.64e-60 191 48 0 199 3 lpsI Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Xanthomonas campestris pv. campestris (strain B100)
O34317 9.14e-60 190 51 1 210 3 yodS Probable coenzyme A transferase subunit alpha Bacillus subtilis (strain 168)
Q9ZLE3 2.01e-59 189 44 1 212 3 scoA Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Helicobacter pylori (strain J99 / ATCC 700824)
P0C7I7 5.9e-59 188 47 0 199 3 lpsI Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
P56006 9.63e-59 187 44 1 212 1 scoA Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Helicobacter pylori (strain ATCC 700392 / 26695)
Q01103 2.51e-58 186 45 3 218 1 pcaI 3-oxoadipate CoA-transferase subunit A Pseudomonas putida
Q43973 2.73e-58 186 45 2 214 1 pcaI 3-oxoadipate CoA-transferase subunit A Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q9W058 8.5e-50 172 41 1 217 1 Scot Succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial Drosophila melanogaster
P9WPW5 2.31e-49 164 40 1 216 1 scoA Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPW4 2.31e-49 164 40 1 216 3 scoA Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63649 2.31e-49 164 40 1 216 3 scoA Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit A Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q54JD9 1.17e-48 169 42 2 227 3 oxct1 Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial Dictyostelium discoideum
Q29551 3.1e-48 168 40 1 216 1 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial Sus scrofa
P55809 1.42e-46 164 40 1 216 1 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial Homo sapiens
Q9D0K2 6.23e-46 162 40 1 216 1 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial Mus musculus
B2GV06 1.07e-45 161 40 1 216 1 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial Rattus norvegicus
Q9JJN4 7.01e-44 156 42 1 223 2 Oxct2a Succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial Mus musculus
Q9BYC2 1.76e-43 155 40 1 216 1 OXCT2 Succinyl-CoA:3-ketoacid coenzyme A transferase 2, mitochondrial Homo sapiens
Q9ESL0 9.87e-43 153 41 1 223 2 Oxct2b Succinyl-CoA:3-ketoacid coenzyme A transferase 2B, mitochondrial Mus musculus
Q5XIJ9 2.11e-40 147 39 1 223 1 Oxct2a Succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial Rattus norvegicus
Q09450 2.08e-39 144 36 1 219 3 C05C10.3 Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial Caenorhabditis elegans
F1CYZ5 2.03e-11 65 26 6 240 1 carA Caffeate CoA-transferase Acetobacterium woodii
P37766 1.03e-10 63 24 2 178 3 ydiF Acetate CoA-transferase YdiF Escherichia coli (strain K12)
Q8X5X6 1.79e-10 63 24 2 178 1 ydiF Acetate CoA-transferase YdiF Escherichia coli O157:H7
O29069 4.48e-07 53 30 8 177 3 AF_1199 Uncharacterized protein AF_1199 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q0S7P9 9.42e-05 45 24 5 209 1 ipdA Cholesterol ring-cleaving hydrolase IpdA subunit Rhodococcus jostii (strain RHA1)
P9WPW1 0.000359 44 23 5 215 1 ipdA Cholesterol ring-cleaving hydrolase IpdA subunit Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPW0 0.000359 44 23 5 215 3 ipdA Cholesterol ring-cleaving hydrolase IpdA subunit Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14305
Feature type CDS
Gene atoD
Product acetate CoA-transferase subunit alpha
Location 83328 - 83978 (strand: 1)
Length 651 (nucleotides) / 216 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2847
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01144 Coenzyme A transferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1788 Lipid transport and metabolism (I) I Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01034 acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] Lysine degradation
Aminobenzoate degradation
Butanoate metabolism
Metabolic pathways
Microbial metabolism in diverse environments
Two-component system		 -

Protein Sequence

MKNKQITIKKAGEFFHDGMTIMVGGFMGIGTPPRLITELLESGVKDLTIIANDTAFVDTGLGPLVVNGRVKKVIASHIGTNPETGRRMIAGEMEVQLVPQGTLAEQIRCGGAGLGGFLTPTGVGTIVEEGKQKITLDGRDYLLELPLRADLALIQAHKADALGNLTYELSSRNFNPLMALAADITIAEPDEMVAVGDIDPDCVATPGAIIDWLIVE

Flanking regions ( +/- flanking 50bp)

GCCACTTGCTATTACCTTTCTGAGAATATTTTATTTCAAAGGGAAGGAAAATGAAAAATAAACAAATAACAATAAAGAAAGCCGGTGAGTTTTTTCATGACGGAATGACCATTATGGTCGGTGGTTTTATGGGTATAGGAACACCACCGCGCTTAATTACCGAATTATTAGAATCCGGCGTAAAAGATTTAACGATTATTGCGAATGATACCGCGTTTGTTGATACCGGCTTAGGTCCGCTGGTGGTGAACGGACGGGTGAAAAAAGTCATTGCATCTCATATCGGAACCAACCCGGAAACCGGACGCCGCATGATTGCCGGTGAAATGGAGGTTCAGCTTGTTCCTCAGGGCACACTGGCGGAGCAAATCCGCTGCGGTGGTGCCGGGCTGGGCGGGTTTTTAACACCCACCGGGGTCGGCACCATTGTTGAAGAGGGAAAACAAAAAATAACCCTCGATGGCCGTGATTATCTTCTCGAACTTCCTCTGCGCGCCGATCTGGCGCTTATTCAGGCTCACAAAGCCGATGCTCTCGGCAACCTCACCTATGAACTCAGCTCCCGCAATTTTAACCCACTGATGGCGCTGGCTGCGGATATCACTATCGCGGAGCCGGATGAAATGGTCGCTGTCGGTGATATTGACCCGGATTGTGTCGCCACACCAGGGGCGATTATTGACTGGCTGATTGTGGAATAAGGAAAACAATGATGAATGCAAAAGAATTGATTGCCCGCCGTGTGGCGCTG