Homologs in group_1608

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10530 FBDBKF_10530 95.0 Morganella morganii S1 nhaC Na+/H+ antiporter NhaC/MleN
EHELCC_14865 EHELCC_14865 95.0 Morganella morganii S2 nhaC Na+/H+ antiporter NhaC/MleN
NLDBIP_14695 NLDBIP_14695 95.0 Morganella morganii S4 nhaC Na+/H+ antiporter NhaC/MleN
LHKJJB_14650 LHKJJB_14650 95.0 Morganella morganii S3 nhaC Na+/H+ antiporter NhaC/MleN
HKOGLL_13270 HKOGLL_13270 95.0 Morganella morganii S5 nhaC Na+/H+ antiporter NhaC/MleN
PMI_RS06155 PMI_RS06155 28.6 Proteus mirabilis HI4320 nhaC Na+/H+ antiporter NhaC

Distribution of the homologs in the orthogroup group_1608

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1608

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44263 6.29e-38 148 27 8 490 4 HI_1586 Uncharacterized protein HI_1586 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P54571 5.07e-08 58 39 3 94 1 mleN Malate-2H(+)/Na(+)-lactate antiporter Bacillus subtilis (strain 168)
Q9HHN1 9.58e-07 54 24 6 239 3 arcD Arginine/ornithine antiporter ArcD Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R9X2 9.58e-07 54 24 6 239 1 arcD Arginine/ornithine antiporter ArcD Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14240
Feature type CDS
Gene -
Product Na+/H+ antiporter NhaC family protein
Location 66383 - 67831 (strand: -1)
Length 1449 (nucleotides) / 482 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1608
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03553 Na+/H+ antiporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1757 Energy production and conversion (C) C Na+/H+ antiporter NhaC/MleN

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18218 tetracycline resistance efflux pump - -

Protein Sequence

MQDYGIWTIITPVVTIILAICTRQVILSLLIGILVGFTVIHDHNILLGIRGTLEGIIDVFKSSGNAKTIIFMLMIGGIMRLVVVTGGVRALVRLLTNKTQIIKGRKGVQLLAMIITSLIFIESSINQLVSGASTKALAKKYGVPPEKMSYIIQTACVSVCSSAMINGWGAAMMGVIGVQISQGLITGEPFDILAHSMVYNIMAWFSLASILFYIFSNVSWGPMRKAEMRAQAINYSADAITGNTTDEVQEPEEDDKDIINHPNCHTSLNFFIPILSTILMVPVALYITGDGDFSKGSGSTSVYWGVMFGTAVSFIWFLLRRVMNVDTFFKELYIGYASMIKISSVMILAFLMGHVSSDLNTGAYIAHVTSGVIAPGFSVGFIFLISAVMSLATGTSWGTFAIMIPIGVQLGISVGMPPEYMIGAAIAGSIFGDMTSPISSDAIVASMATDCDHIEHIRTQMPYAVLTASFALAVYLWLGFTY

Flanking regions ( +/- flanking 50bp)

CCTGAGTCTCCGCGTTTCATTACAATAATAAATAACAGCAGAGAAAGCGTATGCAGGACTATGGAATCTGGACGATCATCACCCCGGTCGTCACTATAATTTTAGCAATTTGTACCCGCCAGGTGATTTTATCACTGCTGATCGGGATACTTGTCGGGTTTACCGTCATTCATGACCACAACATTTTACTGGGCATCAGGGGCACACTTGAAGGCATAATTGATGTCTTTAAGTCATCAGGTAACGCCAAAACCATCATCTTTATGCTGATGATTGGCGGAATTATGCGCCTGGTTGTCGTCACCGGCGGCGTGCGGGCACTTGTGCGACTGCTCACCAATAAAACACAGATAATCAAAGGCAGAAAAGGTGTGCAACTGCTGGCGATGATTATTACCTCACTGATTTTTATTGAAAGCTCAATCAATCAGCTGGTTTCCGGTGCATCCACCAAAGCACTGGCAAAAAAATACGGCGTACCACCTGAGAAGATGTCATACATCATCCAGACCGCCTGTGTCTCTGTTTGTTCTTCTGCCATGATTAACGGCTGGGGTGCGGCAATGATGGGGGTTATCGGTGTCCAGATTTCACAAGGACTGATTACCGGTGAACCATTTGATATTCTTGCACATTCTATGGTGTACAACATCATGGCGTGGTTCTCTCTTGCCAGCATCCTGTTCTACATTTTCAGTAATGTGTCCTGGGGTCCGATGCGTAAAGCAGAAATGCGCGCACAAGCTATCAACTATTCTGCGGATGCTATTACCGGCAATACCACAGATGAAGTGCAAGAGCCGGAAGAAGATGATAAAGATATTATCAATCATCCGAACTGCCATACTTCACTGAACTTCTTTATCCCTATTCTCTCCACCATTCTGATGGTACCGGTAGCGCTGTATATCACAGGCGACGGAGATTTCAGTAAAGGCAGTGGCTCCACATCTGTTTACTGGGGTGTGATGTTCGGGACTGCGGTATCCTTTATCTGGTTCCTTCTCCGCCGCGTAATGAATGTGGATACCTTTTTTAAAGAGCTGTATATCGGCTACGCGAGCATGATTAAAATCAGCTCCGTGATGATCCTCGCTTTCCTGATGGGACATGTTTCCTCTGACCTGAACACCGGCGCCTATATTGCCCATGTGACGTCCGGGGTGATAGCTCCGGGCTTCTCTGTCGGCTTTATCTTCCTTATCAGCGCCGTGATGTCGCTGGCAACCGGAACCTCGTGGGGTACATTCGCGATTATGATCCCGATTGGTGTGCAACTGGGTATTTCTGTCGGGATGCCGCCGGAATATATGATTGGTGCCGCTATTGCCGGGTCTATCTTCGGTGATATGACATCGCCTATCTCCAGTGATGCGATTGTCGCCTCAATGGCAACAGACTGTGACCATATCGAGCATATCCGTACCCAGATGCCGTACGCCGTATTAACAGCAAGTTTTGCACTGGCCGTCTATCTCTGGTTAGGATTCACTTACTGAGACTGACCGGAAACATTCAAGGAAACGCTATGTCATCTTCAGTACTTCCG