Homologs in group_2838

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10525 FBDBKF_10525 87.3 Morganella morganii S1 acd D-cysteine desulfhydrase
EHELCC_14860 EHELCC_14860 87.3 Morganella morganii S2 acd D-cysteine desulfhydrase
NLDBIP_14690 NLDBIP_14690 87.3 Morganella morganii S4 acd D-cysteine desulfhydrase
LHKJJB_14655 LHKJJB_14655 87.3 Morganella morganii S3 acd D-cysteine desulfhydrase
HKOGLL_13275 HKOGLL_13275 87.3 Morganella morganii S5 acd D-cysteine desulfhydrase

Distribution of the homologs in the orthogroup group_2838

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2838

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A1JSN4 6.97e-144 412 64 3 325 3 dcyD D-cysteine desulfhydrase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A8GFZ8 5.45e-143 410 64 3 325 3 dcyD D-cysteine desulfhydrase Serratia proteamaculans (strain 568)
A4TK60 9.65e-139 399 61 3 325 3 dcyD D-cysteine desulfhydrase Yersinia pestis (strain Pestoides F)
Q1CHC4 9.65e-139 399 61 3 325 3 dcyD D-cysteine desulfhydrase Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZF73 9.65e-139 399 61 3 325 3 dcyD D-cysteine desulfhydrase Yersinia pestis
Q66BQ4 7.21e-138 397 61 3 325 3 dcyD D-cysteine desulfhydrase Yersinia pseudotuberculosis serotype I (strain IP32953)
A7FJ17 7.21e-138 397 61 3 325 3 dcyD D-cysteine desulfhydrase Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P59329 2.61e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7LP46 2.81e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A6TB69 3.43e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B1LQT7 3.46e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli (strain SMS-3-5 / SECEC)
P76316 3.46e-137 395 61 2 322 1 dcyD D-cysteine desulfhydrase Escherichia coli (strain K12)
B1IZY5 3.46e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1X677 3.46e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli (strain K12 / DH10B)
C4ZQJ7 3.46e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli (strain K12 / MC4100 / BW2952)
B7MWA6 3.46e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O81 (strain ED1a)
B7L8T2 3.46e-137 395 61 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli (strain 55989 / EAEC)
B4SW60 6.75e-137 394 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella newport (strain SL254)
B4T849 6.75e-137 394 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella heidelberg (strain SL476)
B5R890 6.75e-137 394 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R104 6.75e-137 394 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella enteritidis PT4 (strain P125109)
B5FRX8 6.75e-137 394 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella dublin (strain CT_02021853)
B5F2T4 6.75e-137 394 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella agona (strain SL483)
B7NBR4 8.49e-137 394 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
A8A1C2 9.78e-137 394 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O9:H4 (strain HS)
Q57N48 1.04e-136 394 61 3 324 3 dcyD D-cysteine desulfhydrase Salmonella choleraesuis (strain SC-B67)
Q1RAM1 1.24e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli (strain UTI89 / UPEC)
B7MCH6 1.24e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UST8 1.24e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B5YRU5 1.27e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XBC7 1.27e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O157:H7
P59330 1.45e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Shigella flexneri
Q0T3K8 1.45e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Shigella flexneri serotype 5b (strain 8401)
B2TXG4 1.73e-136 394 60 2 322 3 dcyD D-cysteine desulfhydrase Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B4TYX4 1.76e-136 394 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella schwarzengrund (strain CVM19633)
Q8ZNT7 2.45e-136 393 61 3 324 1 dcyD D-cysteine desulfhydrase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A9MU62 2.92e-136 393 62 3 324 3 dcyD D-cysteine desulfhydrase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8Z5S9 3.67e-136 392 61 3 324 3 dcyD D-cysteine desulfhydrase Salmonella typhi
C0Q2A0 5.74e-136 392 61 3 324 3 dcyD D-cysteine desulfhydrase Salmonella paratyphi C (strain RKS4594)
B7M363 6e-136 392 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O8 (strain IAI1)
B7NRG1 9.09e-136 392 60 2 322 3 dcyD D-cysteine desulfhydrase Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q3Z2U3 3.93e-135 390 60 2 322 3 dcyD D-cysteine desulfhydrase Shigella sonnei (strain Ss046)
B5BGB4 6.08e-135 389 61 3 324 3 dcyD D-cysteine desulfhydrase Salmonella paratyphi A (strain AKU_12601)
Q5PI07 6.08e-135 389 61 3 324 3 dcyD D-cysteine desulfhydrase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5XPW3 7.57e-135 389 61 2 322 3 dcyD D-cysteine desulfhydrase Klebsiella pneumoniae (strain 342)
A3SQG3 2.95e-77 243 46 5 310 1 cuyA L-cysteate sulfo-lyase Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM)
Q5LL69 4.69e-67 217 45 6 311 1 cuyA L-cysteate sulfo-lyase Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
Q8U4R3 3.3e-62 204 38 5 326 3 PF0010 Putative 1-aminocyclopropane-1-carboxylate deaminase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
O57809 9.71e-62 202 39 6 325 1 PH0054 Putative 1-aminocyclopropane-1-carboxylate deaminase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9WY68 2.31e-61 201 39 6 319 3 TM_0225 Putative 1-aminocyclopropane-1-carboxylate deaminase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q0B569 5.8e-58 193 39 7 333 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia ambifaria (strain ATCC BAA-244 / DSM 16087 / CCUG 44356 / LMG 19182 / AMMD)
Q0K1H0 2.31e-57 192 39 8 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
A4JKV8 1.67e-56 189 39 9 334 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia vietnamiensis (strain G4 / LMG 22486)
A9AQJ3 5.36e-56 188 39 7 335 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia multivorans (strain ATCC 17616 / 249)
Q390Z5 1.63e-55 187 38 7 333 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
Q9URX3 3.75e-55 186 37 9 331 3 SPAC922.03 Probable 1-aminocyclopropane-1-carboxylate deaminase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q87YW7 6.12e-55 186 39 10 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
B8IP05 8.22e-55 185 38 9 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Methylobacterium nodulans (strain LMG 21967 / CNCM I-2342 / ORS 2060)
Q63KN7 1.45e-54 184 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia pseudomallei (strain K96243)
A3NKK4 1.45e-54 184 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia pseudomallei (strain 668)
A3P669 1.45e-54 184 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia pseudomallei (strain 1106a)
A1UVN3 1.45e-54 184 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia mallei (strain SAVP1)
Q62CE3 1.45e-54 184 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia mallei (strain ATCC 23344)
A2RWH4 1.45e-54 184 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia mallei (strain NCTC 10229)
A3ME84 1.45e-54 184 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia mallei (strain NCTC 10247)
Q5PWZ8 2.28e-54 184 38 10 331 1 acdS 1-aminocyclopropane-1-carboxylate deaminase Pseudomonas putida
Q98AM7 2.42e-54 184 39 10 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q00740 3.31e-54 184 38 9 335 1 acdS 1-aminocyclopropane-1-carboxylate deaminase Pseudomonas sp. (strain ACP)
Q3JLQ0 1.04e-53 182 39 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia pseudomallei (strain 1710b)
P30297 1.09e-53 182 38 10 331 1 acdS 1-aminocyclopropane-1-carboxylate deaminase Pseudomonas sp. (strain 6G5)
Q4ZVH4 1.13e-53 182 38 10 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Pseudomonas syringae pv. syringae (strain B728a)
Q48KS9 1.2e-53 182 38 10 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
B0UGM0 1.47e-53 182 38 9 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Methylobacterium sp. (strain 4-46)
Q9ZHW3 3.05e-53 181 38 10 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Enterobacter cloacae
A2SLW2 5.03e-53 181 38 9 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Methylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1)
B9JJB7 6.13e-53 180 37 9 329 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Rhizobium rhizogenes (strain K84 / ATCC BAA-868)
B1YYR8 6.64e-53 180 38 8 334 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia ambifaria (strain MC40-6)
Q13ME5 1.05e-52 180 37 7 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Paraburkholderia xenovorans (strain LB400)
B4EJA6 1.83e-52 179 38 7 333 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q1BL32 1.89e-52 179 38 7 333 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia orbicola (strain AU 1054)
A0AXI7 1.89e-52 179 38 7 333 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia cenocepacia (strain HI2424)
Q9V2L2 1.98e-52 179 36 5 330 3 PYRAB00630 Putative 1-aminocyclopropane-1-carboxylate deaminase Pyrococcus abyssi (strain GE5 / Orsay)
Q2T6A1 2.19e-52 179 38 9 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
A1TVP2 2.22e-52 179 39 10 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Paracidovorax citrulli (strain AAC00-1)
Q51813 2.8e-52 179 38 10 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Pseudomonas fluorescens
B2TBV3 4.29e-52 178 37 8 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
B2UGM5 6.57e-52 177 38 9 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Ralstonia pickettii (strain 12J)
B9MGI8 7.46e-52 177 38 8 330 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Acidovorax ebreus (strain TPSY)
B1K774 9.95e-52 177 38 7 333 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Burkholderia orbicola (strain MC0-3)
Q89XR6 1e-51 177 37 8 329 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q8XS35 1.15e-50 174 39 8 318 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
B9K206 1.48e-50 174 36 8 329 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Allorhizobium ampelinum (strain ATCC BAA-846 / DSM 112012 / S4)
C5CQC9 2.18e-50 174 38 9 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Variovorax paradoxus (strain S110)
Q6J256 6.96e-50 172 39 9 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Variovorax paradoxus
A4YUJ5 7.06e-50 172 35 7 329 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Bradyrhizobium sp. (strain ORS 278)
A5EJ46 1.24e-49 172 36 10 334 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Q93AG0 4.53e-49 170 36 10 331 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Rhizobium leguminosarum bv. viciae
Q9AHF0 5.45e-49 170 35 9 332 3 acdS 1-aminocyclopropane-1-carboxylate deaminase Rhizobium radiobacter
Q7M523 3.62e-48 168 36 9 330 1 None 1-aminocyclopropane-1-carboxylate deaminase Cyberlindnera saturnus
F4HYF3 1.81e-44 160 34 6 313 1 DCD Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial Arabidopsis thaliana
Q5KMX3 5.69e-44 157 35 9 325 3 CNB00190 Probable 1-aminocyclopropane-1-carboxylate deaminase Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
Q6ZHE5 8.63e-43 156 35 6 316 1 DCD1 D-cysteine desulfhydrase 1, mitochondrial Oryza sativa subsp. japonica
Q5J1R2 1.46e-10 65 26 10 307 1 nocJ Nocardicin C-9' epimerase Nocardia uniformis subsp. tsuyamanensis
A1L4V7 6.8e-10 63 26 13 333 2 At3g26115 D-cysteine desulfhydrase 2, mitochondrial Arabidopsis thaliana
B9EYZ1 1.39e-08 59 25 12 326 3 Os01g0695600 Putative D-cysteine desulfhydrase 2, mitochondrial Oryza sativa subsp. japonica

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14235
Feature type CDS
Gene -
Product D-cysteine desulfhydrase
Location 65331 - 66353 (strand: -1)
Length 1023 (nucleotides) / 340 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2838
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00291 Pyridoxal-phosphate dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2515 Amino acid transport and metabolism (E) E 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family

Protein Sequence

MSSSVLPAGETRLHQTLALFSKIDLLGGVMPLNKLNHLSRLLGRDIYIKRDDLTPLAAGGNKLRKLEFLMADALEQGAKIIVTAGAIQSNHVRQTAAVAAMYGLKCIALLENPIGSQETNFLNNGNKLLSDLFGAQCVMCDALTDPDAQMQALIDKMQLKSAYIIPVGGSNLLGSLGYVQCALEIAQQQPEGVEFGAVVVASGSAGTHAGLSVGLQLAMPQTPVIGVTVSRTYADQAPKVIKLQNELAPLFGIETPAPVILWDDYFAPEYGMPNAGGLEAIELLARSEGILLDPVYTGKAMAGLIDQVRRNPQDTSPLLFIHTGGATGLFAYQEVSAPIK

Flanking regions ( +/- flanking 50bp)

TGGTTAGGATTCACTTACTGAGACTGACCGGAAACATTCAAGGAAACGCTATGTCATCTTCAGTACTTCCGGCCGGGGAAACCCGGCTGCATCAAACACTGGCACTGTTCAGTAAGATTGATTTACTCGGCGGCGTAATGCCTCTGAATAAACTGAATCACCTATCCCGCCTGCTGGGACGGGATATTTACATCAAGCGTGATGATTTAACGCCTCTCGCCGCCGGGGGTAATAAACTGCGCAAGCTGGAATTTCTGATGGCAGATGCTCTGGAGCAAGGGGCAAAAATCATTGTGACCGCCGGCGCAATCCAGTCAAATCACGTCCGCCAGACAGCGGCTGTCGCTGCCATGTACGGGCTGAAATGCATTGCACTGCTGGAAAACCCGATAGGCAGTCAGGAAACAAACTTTCTGAACAACGGCAATAAACTGCTGAGTGATTTATTCGGCGCACAGTGTGTTATGTGTGATGCACTGACCGATCCCGATGCACAGATGCAGGCACTTATTGATAAAATGCAGCTCAAATCTGCCTATATCATCCCGGTTGGCGGCTCAAATCTGTTAGGTTCTCTCGGGTATGTACAGTGCGCGCTGGAAATTGCACAGCAACAACCTGAAGGTGTTGAATTCGGCGCCGTCGTCGTTGCTTCCGGCAGTGCGGGAACGCATGCCGGGCTTTCTGTCGGGTTGCAGCTCGCCATGCCGCAAACCCCGGTTATCGGTGTCACTGTGTCACGCACTTACGCTGACCAGGCGCCGAAAGTCATCAAACTGCAAAATGAACTGGCGCCGCTGTTTGGTATTGAAACACCGGCTCCGGTCATCCTGTGGGATGATTACTTTGCACCGGAATACGGTATGCCGAATGCGGGCGGACTGGAAGCGATTGAGCTGCTGGCACGCAGCGAAGGTATTCTTCTGGATCCTGTTTATACCGGTAAAGCAATGGCGGGATTGATTGACCAGGTGCGCCGTAACCCGCAGGATACCTCACCACTGCTGTTTATTCATACGGGTGGTGCAACAGGCTTATTTGCTTATCAGGAAGTAAGTGCTCCGATAAAATAATAATCCATCAACGTGCTGCTAAAATCCAACAGATACGGGTAACATATTAT