Homologs in group_1587

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10355 FBDBKF_10355 84.9 Morganella morganii S1 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
EHELCC_14690 EHELCC_14690 84.9 Morganella morganii S2 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
NLDBIP_14520 NLDBIP_14520 84.9 Morganella morganii S4 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
LHKJJB_14825 LHKJJB_14825 84.9 Morganella morganii S3 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
HKOGLL_13445 HKOGLL_13445 84.9 Morganella morganii S5 yhaK Redox-sensitive bicupin YhaK, pirin superfamily
PMI_RS14910 PMI_RS14910 72.0 Proteus mirabilis HI4320 - pirin family protein

Distribution of the homologs in the orthogroup group_1587

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1587

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46852 3.22e-131 372 76 0 229 1 yhhW Quercetin 2,3-dioxygenase Escherichia coli (strain K12)
P58116 2.58e-130 369 76 0 229 3 yhhW Quercetin 2,3-dioxygenase Escherichia coli O157:H7
Q9CKD7 6.32e-82 247 52 2 232 3 PM1685 Putative quercetin 2,3-dioxygenase PM1685 Pasteurella multocida (strain Pm70)
P73623 7.51e-73 224 49 3 233 3 sll1773 Putative quercetin 2,3-dioxygenase sll1773 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9I4C8 2.61e-60 192 45 4 232 3 PA1210 Putative quercetin 2,3-dioxygenase PA1210 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9XBR7 3.67e-51 169 40 4 230 3 ZMO1337 Putative quercetin 2,3-dioxygenase ZMO1337 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
P58113 2.31e-50 167 39 3 231 3 CC_1473 Pirin-like protein CC_1473 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P65725 1.12e-38 137 37 5 236 3 BQ2027_MB0187C Putative quercetin 2,3-dioxygenase Mb0187c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WI85 1.12e-38 137 37 5 236 1 Rv0181c Putative quercetin 2,3-dioxygenase Rv0181c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WI84 1.12e-38 137 37 5 236 3 MT0190 Putative quercetin 2,3-dioxygenase MT0190 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P42624 1.69e-34 126 32 4 234 1 yhaK Pirin-like protein YhaK Escherichia coli (strain K12)
P58115 8.97e-34 124 32 4 234 2 yhaK Pirin-like protein YhaK Escherichia coli O157:H7
Q9I163 4.61e-14 73 29 7 196 3 PA2418 Putative quercetin 2,3-dioxygenase PA2418 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9HZ00 6.32e-12 67 29 8 202 3 PA3240 Putative quercetin 2,3-dioxygenase PA3240 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9KKY1 1.7e-11 65 27 6 197 3 VC_A0969 Putative quercetin 2,3-dioxygenase VC_A0969 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P58112 5.77e-11 64 27 5 194 3 CC_0481 Pirin-like protein CC_0481 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q9LPS9 1.85e-10 63 38 1 90 2 At1g50590 Pirin-like protein At1g50590 Arabidopsis thaliana
Q9LX49 3.25e-10 62 41 4 82 1 PRN1 Pirin-1 Arabidopsis thaliana
Q9ZW82 3.56e-10 62 43 2 78 1 PRN2 Pirin-like protein 2 Arabidopsis thaliana
Q9SEE4 1.52e-09 60 37 2 93 2 None Pirin-like protein Solanum lycopersicum
Q9I4D3 4.04e-09 59 36 1 83 3 PA1205 Putative quercetin 2,3-dioxygenase PA1205 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9LX45 1.72e-08 57 44 2 67 3 At3g59260 Putative pirin-like protein At3g59260 Arabidopsis thaliana
Q9D711 4.72e-07 52 32 4 98 1 Pir Pirin Mus musculus
O00625 1.05e-06 52 31 3 89 1 PIR Pirin Homo sapiens
Q9HLU2 1.24e-06 51 44 0 52 3 Ta0133 Putative quercetin 2,3-dioxygenase Ta0133 Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Q5M827 1.65e-06 51 38 2 68 1 Pir Pirin Rattus norvegicus
P58114 5.21e-05 47 44 0 47 3 CC_3178 Pirin-like protein CC_3178 Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14050
Feature type CDS
Gene -
Product pirin family protein
Location 21524 - 22222 (strand: 1)
Length 699 (nucleotides) / 232 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1587
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02678 Pirin
PF17954 Quercetinase C-terminal cupin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1741 General function prediction only (R) R Redox-sensitive bicupin YhaK, pirin superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06911 quercetin 2,3-dioxygenase [EC:1.13.11.24] - -

Protein Sequence

MIYVRSANERGHATHGWLESWHTFSFADYYDRDFMGFSALRVINEDFIEAGKGFGTHPHKDMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPDDTTALHLYQIWIIPETTGLAPRYEQRRFDAVNGRQLVLSPDARDGSLKVFQDMTLWRWALTGGEEGSYQPQSGRMIWIQVVKGALTINGHTAVTSDGVAIRDEDLLSLRATEDSEILLFDLPAAD

Flanking regions ( +/- flanking 50bp)

ATTTCTGTGGCGGACGTAAACTGTTTCTTATCAGATTAAGGAGACAAATTATGATTTATGTACGCTCTGCAAATGAACGCGGTCATGCAACTCACGGCTGGCTTGAAAGCTGGCACACTTTTTCATTCGCTGATTATTATGACCGGGACTTTATGGGGTTTTCCGCGCTGCGGGTGATTAATGAAGATTTTATTGAAGCAGGCAAAGGGTTCGGCACACATCCGCATAAAGATATGGAGATCCTGACCTATGTCCTGGAAGGGGCGGTTGAGCATCAGGACAGTATGGGAAATAAAGAGCAGGTGCCTGCCGGTGAATTCCAGATAATGAGCGCCGGTACCGGGATCCGCCATTCGGAATATAATCCTGATGATACGACGGCGCTGCATTTATATCAGATTTGGATAATTCCGGAGACTACGGGGCTGGCACCACGCTATGAGCAACGCCGGTTTGATGCTGTAAACGGACGCCAGCTGGTGTTGTCACCGGATGCCCGCGACGGGTCGCTTAAAGTCTTTCAGGATATGACGCTGTGGCGCTGGGCACTGACAGGTGGCGAGGAAGGGTCGTATCAGCCACAGAGCGGGCGGATGATCTGGATCCAGGTAGTGAAAGGTGCGCTGACTATTAATGGTCACACAGCGGTCACCAGTGATGGTGTGGCTATCCGCGATGAAGACCTGCTCAGTCTGCGGGCTACAGAGGACAGTGAAATACTGCTGTTTGACCTGCCTGCTGCGGATTAAAACAGAAAGCCCCGGACTTTTGATCCGGGGCTGCTGTTTTGCTCACACTG