Homologs in group_218

Help

8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18785 FBDBKF_18785 82.2 Morganella morganii S1 - Lipoprotein
EHELCC_16980 EHELCC_16980 82.2 Morganella morganii S2 - Lipoprotein
NLDBIP_18360 NLDBIP_18360 82.2 Morganella morganii S4 - Lipoprotein
LHKJJB_09265 LHKJJB_09265 82.2 Morganella morganii S3 - Lipoprotein
HKOGLL_08815 HKOGLL_08815 82.2 Morganella morganii S5 - Lipoprotein
PMI_RS06460 PMI_RS06460 28.8 Proteus mirabilis HI4320 - hypothetical protein
PMI_RS08815 PMI_RS08815 48.5 Proteus mirabilis HI4320 - hypothetical protein
PMI_RS19150 PMI_RS19150 24.5 Proteus mirabilis HI4320 - YhfL family protein

Distribution of the homologs in the orthogroup group_218

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_218

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13810
Feature type CDS
Gene -
Product hypothetical protein
Location 396484 - 397377 (strand: -1)
Length 894 (nucleotides) / 297 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_218
Orthogroup size 9
N. genomes 7

Actions

Genomic region

Protein Sequence

MKTTLKLSVLSVAVLLAAACDSLDPDSTKNEFWYSNPANSALTFKVDDKDYALEPGTTGSVKLSPGMHSIQNAKGEKYTFMVYENNSGGIINPDNHVYYMLSEIYATEGQSARFKPALFDVTINGHELQMPVRSSNAVMIDHNLFNCSYPVGKPFPDEITTGDRKSVGNIKTKCFDKAELVAYIASDYGQKLAPAAPGDEIKDSVNMTFDYTIPVPAFKDAETQKQAVKLTGLLTQIKESDNADIHDKLNDEIHQTTMALVSASAKSGSSNTVAENEYHNDFMKQTGNFRGYGVLPK

Flanking regions ( +/- flanking 50bp)

AATGATTGATAATATCGGGCTTATAATCCGAAGATATAATGAGATAGCAAATGAAAACCACATTAAAATTAAGTGTATTAAGCGTTGCTGTTTTACTGGCAGCAGCATGTGACAGCCTGGATCCTGATAGTACAAAAAATGAGTTCTGGTACAGTAATCCGGCGAACAGCGCGCTGACATTTAAAGTGGATGATAAAGATTATGCCCTTGAGCCGGGAACGACCGGCAGCGTTAAATTATCACCCGGTATGCACAGCATTCAGAATGCAAAAGGTGAGAAATACACTTTTATGGTGTATGAAAATAACAGTGGCGGCATTATTAACCCGGATAATCACGTTTATTATATGTTATCGGAAATATATGCGACAGAAGGTCAGAGTGCCCGTTTTAAACCGGCGCTTTTTGATGTCACCATTAATGGTCATGAATTACAGATGCCGGTGCGCAGCAGTAATGCGGTAATGATTGACCATAACCTGTTTAATTGCAGCTATCCGGTTGGTAAGCCATTCCCGGATGAAATTACCACCGGTGACCGCAAGTCTGTCGGTAATATTAAAACAAAATGTTTTGATAAGGCGGAATTAGTCGCTTATATCGCGTCTGATTATGGTCAAAAATTGGCTCCGGCGGCTCCCGGAGATGAAATCAAAGACAGTGTGAATATGACCTTTGATTATACTATTCCTGTGCCTGCTTTTAAGGATGCAGAGACACAGAAGCAGGCTGTAAAATTAACCGGTCTTCTGACACAGATAAAGGAGTCAGATAATGCGGATATTCACGATAAGCTCAATGATGAAATCCACCAGACAACAATGGCTTTGGTTTCTGCTTCGGCAAAAAGTGGCTCTTCAAATACCGTTGCAGAGAATGAGTATCACAATGATTTTATGAAACAGACAGGTAATTTCCGTGGTTATGGCGTTCTGCCAAAATAAGCGGATTACAGGATGATTTTTCAGAGAGGGCGGCACAGTGTGCTGCCTTT