Homologs in group_1313

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08080 FBDBKF_08080 77.3 Morganella morganii S1 dmsC DMSO reductase anchor subunit DmsC
EHELCC_13910 EHELCC_13910 77.3 Morganella morganii S2 dmsC DMSO reductase anchor subunit DmsC
NLDBIP_14355 NLDBIP_14355 77.3 Morganella morganii S4 dmsC DMSO reductase anchor subunit DmsC
LHKJJB_08495 LHKJJB_08495 77.3 Morganella morganii S3 dmsC DMSO reductase anchor subunit DmsC
HKOGLL_08045 HKOGLL_08045 77.3 Morganella morganii S5 dmsC DMSO reductase anchor subunit DmsC
PMI_RS14665 PMI_RS14665 59.9 Proteus mirabilis HI4320 - dimethyl sulfoxide reductase anchor subunit

Distribution of the homologs in the orthogroup group_1313

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1313

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76173 1.67e-13 72 32 5 162 3 ynfH Anaerobic dimethyl sulfoxide reductase chain YnfH Escherichia coli (strain K12)
P45002 2.61e-10 63 33 6 175 3 dmsC Anaerobic dimethyl sulfoxide reductase chain C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P18777 7.98e-08 56 32 6 160 1 dmsC Anaerobic dimethyl sulfoxide reductase chain C Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12915
Feature type CDS
Gene -
Product DmsC/YnfH family molybdoenzyme membrane anchor subunit
Location 189443 - 190354 (strand: -1)
Length 912 (nucleotides) / 303 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1313
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04976 DMSO reductase anchor subunit (DmsC)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3302 Energy production and conversion (C) C DMSO reductase anchor subunit DmsC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07308 anaerobic dimethyl sulfoxide reductase subunit C Sulfur metabolism
Metabolic pathways		 -

Protein Sequence

MNEWSLLIFTYMMNAAVGLCVVSGVFAAPLSRRLTADSFKRMMMLTIFIICIIAGIGSVASITHLGVPLNAPNAINNVFTAWLSREVVVTAAFVGSLGVTFLWLWKSGKLSFLLFGAAMAIGLADIYCMASIYRYTSILTWNDANTYLMFFATMLSLGVALYVLMMMFVQRFGHKAGVIVPADYLSVSRLWLLWSVMAVSLTGRLLYQPFYEHWLTATQLSQKSVTFPLSPITAYYSIAGLRISTWIMAVAGLLLCGITLVRAGSAKRRDTEYQAAGGLFLTGCLLTIIAEFMLRYVFYYIHA

Flanking regions ( +/- flanking 50bp)

TGCGCATCACGGGGCACGTTTTGATGACATAAACAGTGAGAGAAAAGAAAATGAATGAGTGGTCGCTTTTAATTTTCACTTACATGATGAATGCGGCGGTGGGGTTGTGCGTTGTGAGCGGGGTGTTTGCCGCACCGCTCTCCCGCCGCCTCACGGCAGACAGTTTTAAACGCATGATGATGCTGACAATCTTTATTATCTGCATTATTGCGGGGATCGGATCAGTGGCATCTATCACGCACCTTGGTGTGCCGTTAAATGCCCCGAATGCCATTAATAATGTCTTTACGGCCTGGCTCAGCCGTGAAGTGGTGGTGACGGCAGCATTTGTCGGCAGCCTGGGTGTGACATTCCTCTGGTTGTGGAAATCGGGAAAACTCTCTTTTCTGCTGTTTGGCGCAGCAATGGCGATTGGTTTGGCTGATATTTACTGTATGGCGTCGATTTACCGCTATACCTCGATTCTGACGTGGAATGATGCCAATACCTATCTGATGTTTTTCGCCACTATGCTGAGCCTGGGTGTGGCACTGTATGTGCTGATGATGATGTTTGTTCAGCGGTTTGGTCATAAAGCGGGGGTTATTGTCCCGGCGGACTATCTGTCTGTTTCCCGTTTGTGGCTGTTGTGGAGTGTGATGGCGGTAAGCCTGACCGGGCGCCTGTTATATCAGCCATTTTATGAGCACTGGCTGACCGCCACACAGTTATCGCAAAAATCGGTTACTTTTCCGCTCTCACCCATCACCGCCTATTACAGCATTGCCGGATTGCGGATAAGCACCTGGATTATGGCGGTTGCCGGGCTTCTTTTGTGTGGTATCACACTGGTTCGTGCAGGATCGGCGAAAAGACGGGATACGGAGTATCAGGCGGCGGGTGGGTTATTTCTTACCGGGTGTCTGCTGACCATTATTGCAGAATTTATGCTGCGTTATGTCTTCTATTATATTCACGCCTGACGGGAGTGCCTGATGAGTAAGATCTCCCATTATGCGGCGGCGTTTAACGT