Homologs in group_1856

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13880 FBDBKF_13880 78.1 Morganella morganii S1 - Mannosyl-3-phosphoglycerate phosphatase family
EHELCC_11550 EHELCC_11550 78.1 Morganella morganii S2 - Mannosyl-3-phosphoglycerate phosphatase family
NLDBIP_11895 NLDBIP_11895 78.1 Morganella morganii S4 - Mannosyl-3-phosphoglycerate phosphatase family
LHKJJB_11755 LHKJJB_11755 78.1 Morganella morganii S3 - Mannosyl-3-phosphoglycerate phosphatase family
HKOGLL_10365 HKOGLL_10365 78.1 Morganella morganii S5 - Mannosyl-3-phosphoglycerate phosphatase family
PMI_RS11825 PMI_RS11825 69.1 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_1856

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1856

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12745
Feature type CDS
Gene -
Product hypothetical protein
Location 149061 - 149843 (strand: 1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1856
Orthogroup size 7
N. genomes 7

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3769 Carbohydrate transport and metabolism (G) G Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily

Protein Sequence

MTDPVILTDLDDTLFQTRRKMTEEQNITPFRAGALDRSLEPRSFMTQEQSMLVDWLLAHADLIPVTARGTEEFSRVTIPFCSYAITTHGAVILTPDGSPDPHWQTLILSALAPYRERLLSLQKFCTQLMAERGIDAWARINYEYGDVPVYLVMKHTDSNHLNELYKIADEAEQRFGTDGFYIHRNGNNVAWLPDAIEKGRAVSWLLDTLRAERGTFPVIGLGDSLSDYRFMQHCTWFGLPRRSQFADAIARRIFSEVKDV

Flanking regions ( +/- flanking 50bp)

ATTACTCCGCGCACTTGCCCGCGTGGCACCCCTGACGGAGGTAATTTATGATGACTGACCCGGTGATCCTGACCGATCTGGATGACACCCTGTTCCAGACCCGGCGAAAAATGACGGAAGAACAAAACATTACGCCGTTTCGTGCGGGCGCACTTGATCGCAGCCTCGAGCCGCGCAGCTTTATGACACAAGAACAGTCCATGCTGGTTGACTGGCTGCTGGCGCACGCGGATCTGATCCCTGTGACCGCCCGTGGTACAGAAGAGTTCAGCCGCGTGACTATTCCCTTCTGCTCTTATGCAATAACCACTCACGGCGCAGTGATCCTCACGCCGGACGGCTCGCCGGATCCGCACTGGCAGACGCTCATACTCAGTGCGCTGGCACCTTACCGTGAACGGCTGCTCTCATTGCAGAAATTCTGCACACAACTGATGGCAGAGCGCGGTATTGATGCATGGGCGCGGATCAATTATGAATACGGCGATGTGCCGGTCTATCTGGTGATGAAGCACACGGACAGCAACCATCTGAATGAACTGTATAAGATAGCGGATGAAGCAGAGCAGCGTTTCGGGACGGACGGATTTTATATCCACCGCAACGGCAACAATGTTGCCTGGCTGCCAGATGCCATCGAAAAAGGGCGTGCAGTCAGTTGGTTATTAGACACACTGCGGGCAGAGCGGGGAACCTTTCCGGTTATCGGGCTCGGTGACAGCCTGAGCGACTACCGCTTTATGCAGCACTGCACCTGGTTTGGTTTGCCGCGCCGCAGCCAGTTCGCTGATGCTATCGCCCGCCGGATATTCAGTGAGGTGAAAGATGTATGATTTTCCTGAATTTTCAGGCAGTTATTTGCCGGAAGATGTGCAGTTTCTGC