Homologs in group_249

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03225 FBDBKF_03225 27.5 Morganella morganii S1 kdsD arabinose-5-phosphate isomerase KdsD
EHELCC_07310 EHELCC_07310 27.5 Morganella morganii S2 kdsD arabinose-5-phosphate isomerase KdsD
NLDBIP_07635 NLDBIP_07635 27.5 Morganella morganii S4 kdsD arabinose-5-phosphate isomerase KdsD
LHKJJB_07170 LHKJJB_07170 27.5 Morganella morganii S3 kdsD arabinose-5-phosphate isomerase KdsD
HKOGLL_03760 HKOGLL_03760 27.5 Morganella morganii S5 kdsD arabinose-5-phosphate isomerase KdsD
F4V73_RS11695 F4V73_RS11695 27.0 Morganella psychrotolerans kdsD arabinose-5-phosphate isomerase KdsD
PMI_RS18175 PMI_RS18175 28.4 Proteus mirabilis HI4320 kdsD arabinose-5-phosphate isomerase KdsD

Distribution of the homologs in the orthogroup group_249

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_249

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q58821 2.6e-11 63 31 4 154 4 MJ1426 Uncharacterized protein MJ1426 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9C5D0 1.71e-10 62 30 3 136 1 CBSX2 CBS domain-containing protein CBSX2, chloroplastic Arabidopsis thaliana
Q9C5D0 0.000168 45 37 1 64 1 CBSX2 CBS domain-containing protein CBSX2, chloroplastic Arabidopsis thaliana
O23193 2.56e-09 59 28 2 135 1 CBSX1 CBS domain-containing protein CBSX1, chloroplastic Arabidopsis thaliana
O23193 0.000122 45 37 1 64 1 CBSX1 CBS domain-containing protein CBSX1, chloroplastic Arabidopsis thaliana
O34682 9.19e-09 56 26 4 144 4 ylbB Uncharacterized protein YlbB Bacillus subtilis (strain 168)
A9A5Y7 9e-08 55 26 5 192 3 guaB Inosine-5'-monophosphate dehydrogenase Nitrosopumilus maritimus (strain SCM1)
O67820 4.3e-07 53 31 5 137 3 guaB Inosine-5'-monophosphate dehydrogenase Aquifex aeolicus (strain VF5)
P74081 7.05e-07 53 27 2 146 1 sll1253 A-adding tRNA nucleotidyltransferase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
A2SQW3 1.79e-06 52 28 3 136 1 metXA Homoserine O-acetyltransferase Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)
Q57564 3.05e-06 51 26 3 141 1 MJ0100 L-aspartate semialdehyde sulfurtransferase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58278 4.4e-06 48 25 4 145 4 MJ0868 Uncharacterized protein MJ0868 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q74CU0 6.29e-06 50 27 3 143 1 GSU1581 A-adding tRNA nucleotidyltransferase Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
K2QXP6 8.49e-06 49 29 3 135 1 metXA Homoserine O-acetyltransferase Methanobacterium formicicum (strain DSM 3637 / PP1)
O66728 1.11e-05 49 28 4 140 1 aq_411 A-adding tRNA nucleotidyltransferase Aquifex aeolicus (strain VF5)
Q49729 1.51e-05 48 28 3 137 3 guaB Inosine-5'-monophosphate dehydrogenase Mycobacterium leprae (strain TN)
P54606 1.58e-05 47 25 3 136 4 yhcV CBS domain-containing protein YhcV Bacillus subtilis (strain 168)
Q58069 2.27e-05 47 25 3 138 4 MJ0653 Uncharacterized protein MJ0653 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
B1L5U5 4.86e-05 47 26 3 130 3 guaB Inosine-5'-monophosphate dehydrogenase Korarchaeum cryptofilum (strain OPF8)
Q54H97 6.79e-05 45 39 0 51 2 DDB_G0289609 CBS domain-containing protein DDB_G0289609 Dictyostelium discoideum
P50100 0.000147 45 41 0 55 4 MK0525 Uncharacterized protein MK0525 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Q57837 0.000176 45 28 5 144 1 MJ0392 Zinc metalloprotease MJ0392 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58799 0.000201 45 27 3 129 4 MJ1404 Uncharacterized protein MJ1404 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58799 0.000473 44 26 1 138 4 MJ1404 Uncharacterized protein MJ1404 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P39066 0.000249 44 23 2 143 4 acuB Acetoin utilization protein AcuB Bacillus subtilis (strain 168)
Q12XS2 0.000251 45 28 3 137 1 metXA Homoserine O-acetyltransferase Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Q58622 0.000355 44 22 5 205 1 MJ1225 Uncharacterized protein MJ1225 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P9WJA3 0.000374 43 21 4 141 1 hrp1 Hypoxic response protein 1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WJA2 0.000374 43 21 4 141 2 hrp1 Hypoxic response protein 1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
O58045 0.000444 44 44 0 50 1 guaB Inosine-5'-monophosphate dehydrogenase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
P42851 0.000706 43 46 0 43 3 guaB Inosine-5'-monophosphate dehydrogenase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q2LL38 0.000853 43 28 4 132 2 PRKAG3 5'-AMP-activated protein kinase subunit gamma-3 Bos taurus
Q58332 0.001 41 38 2 60 1 MJ0922 Uncharacterized protein MJ0922 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12535
Feature type CDS
Gene -
Product CBS domain-containing protein
Location 98583 - 99311 (strand: 1)
Length 729 (nucleotides) / 242 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_249
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00571 CBS domain
PF04972 BON domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3448 Signal transduction mechanisms (T) T CBS-domain-containing membrane protein

Protein Sequence

MIAADVMTTAPVTVNEDTPILEVVSLLLNLQISGLPVLDAAGKMSGIVTEGDLLRRSELGTEIKRPHWKELFLSPGKLARDYVQCHGLYAGEVMTPDPLTIGPQTPLDEVIHLIESYGIKRVPVVEDDKLLGIITRVDILKALRTILIHNSTSNKAGNEIIDDKSVKQDIMDKIFSQPWAPKSNIRITVAHGVVDIYGTILDENLRSALITAIEEVTGNHRVHDHLVFIEPITGLYIENKDE

Flanking regions ( +/- flanking 50bp)

TAAAAAACGGTTATTCCACCACCAAAAACCTTACGGTCAGGAGATAAAAAATGATTGCTGCTGATGTGATGACTACCGCACCTGTTACGGTAAACGAAGACACCCCTATTCTTGAGGTTGTGAGTCTGCTCCTCAATCTGCAAATAAGTGGTCTGCCGGTGCTGGATGCCGCAGGAAAAATGTCAGGTATTGTGACTGAAGGTGACCTTCTGCGCCGGAGTGAACTGGGAACTGAAATAAAACGGCCTCACTGGAAAGAGCTGTTTTTAAGTCCCGGTAAGCTTGCCAGAGATTATGTTCAGTGCCACGGACTGTATGCCGGAGAGGTAATGACTCCCGACCCGTTAACTATCGGACCACAGACACCACTGGATGAAGTTATCCATCTGATAGAGAGCTACGGTATCAAACGGGTTCCGGTCGTGGAAGACGATAAATTGCTTGGCATCATTACCCGTGTGGATATTTTAAAGGCACTCCGCACCATACTGATACACAACAGCACGTCAAATAAAGCAGGTAATGAAATAATTGATGATAAGTCAGTTAAACAAGACATTATGGACAAGATTTTCAGTCAGCCCTGGGCACCAAAGAGCAATATCCGTATTACAGTCGCACACGGTGTTGTGGATATATACGGCACTATTCTTGATGAAAACTTACGAAGCGCATTAATTACCGCAATAGAAGAAGTAACCGGTAATCATCGTGTACACGATCACCTTGTATTTATAGAACCTATTACCGGGCTGTATATCGAAAATAAAGACGAATAACACAGCTGTATTTATAAATACGTATTGCGGTACGACTACCCAATCCCGGT