Homologs in group_1991

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14995 FBDBKF_14995 88.4 Morganella morganii S1 mutY A/G-specific adenine glycosylase
EHELCC_11250 EHELCC_11250 88.4 Morganella morganii S2 mutY A/G-specific adenine glycosylase
NLDBIP_11595 NLDBIP_11595 88.4 Morganella morganii S4 mutY A/G-specific adenine glycosylase
LHKJJB_11455 LHKJJB_11455 88.4 Morganella morganii S3 mutY A/G-specific adenine glycosylase
HKOGLL_10065 HKOGLL_10065 88.4 Morganella morganii S5 mutY A/G-specific adenine glycosylase
PMI_RS01555 PMI_RS01555 72.2 Proteus mirabilis HI4320 mutY A/G-specific adenine glycosylase

Distribution of the homologs in the orthogroup group_1991

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1991

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P17802 0.0 513 68 0 344 1 mutY Adenine DNA glycosylase Escherichia coli (strain K12)
Q05869 0.0 509 69 0 344 3 mutY Adenine DNA glycosylase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44320 1.14e-141 409 59 3 359 3 mutY Adenine DNA glycosylase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57617 4.33e-117 345 45 1 344 3 mutY Adenine DNA glycosylase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89A45 3.55e-113 335 45 2 345 3 mutY Adenine DNA glycosylase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8K926 2.1e-108 323 46 2 344 3 mutY Adenine DNA glycosylase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P83847 3.22e-70 226 38 4 302 1 mutY Adenine DNA glycosylase Geobacillus stearothermophilus
O31584 1.31e-66 217 38 3 301 2 mutY Adenine DNA glycosylase Bacillus subtilis (strain 168)
Q8R5G2 2.16e-57 197 36 9 360 2 Mutyh Adenine DNA glycosylase Rattus norvegicus
Q99P21 1.23e-54 189 35 8 359 1 Mutyh Adenine DNA glycosylase Mus musculus
Q9UIF7 6.15e-53 186 34 9 362 1 MUTYH Adenine DNA glycosylase Homo sapiens
P46230 3.3e-43 147 71 0 95 3 mutY Adenine DNA glycosylase (Fragment) Aeromonas hydrophila
Q10159 6.68e-40 149 31 11 329 1 myh1 Adenine DNA glycosylase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
F4JRF4 6.8e-40 151 31 8 350 3 MYH Adenine DNA glycosylase Arabidopsis thaliana
Q9YDP0 1.15e-35 132 32 2 209 1 APE_0875.1 Thymine-DNA glycosylase Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q7LX22 2.05e-35 131 30 3 219 1 PAE3199 Thymine/uracil-DNA glycosylase Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2)
P9WQ09 8.24e-35 132 36 2 216 1 mutY Adenine DNA glycosylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQ08 8.24e-35 132 36 2 216 3 mutY Adenine DNA glycosylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A0R567 1.03e-30 121 36 4 199 1 mutY Adenine DNA glycosylase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P29588 1.69e-28 113 25 3 209 1 mig Thymine/uracil-DNA glycosylase Methanothermobacter thermautotrophicus
Q9WYK0 3.73e-13 71 24 3 190 3 nth Endonuclease III Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P46303 5.35e-13 71 28 3 187 1 pdg Ultraviolet N-glycosylase/AP lyase Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / CCM 169 / CCUG 5858 / IAM 1056 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)
P39788 3.75e-12 68 25 3 181 3 nth Endonuclease III Bacillus subtilis (strain 168)
Q58030 3.41e-09 61 22 5 198 3 nth Endonuclease III Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P73715 9.74e-09 58 25 5 190 3 nth Endonuclease III Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q89AW4 2.27e-08 57 29 3 129 3 nth Endonuclease III Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8SRB8 4.14e-08 57 24 8 198 1 NTH1 Endonuclease III homolog Encephalitozoon cuniculi (strain GB-M1)
Q8KA16 1.06e-07 55 26 4 142 3 nth Endonuclease III Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P9WQ11 1.99e-07 55 25 4 188 1 nth Endonuclease III Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQ10 1.99e-07 55 25 4 188 3 nth Endonuclease III Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63541 1.99e-07 55 25 4 188 3 nth Endonuclease III Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9SIC4 4.75e-07 54 29 6 141 2 NTH1 Endonuclease III homolog 1, chloroplastic Arabidopsis thaliana
Q9CB92 4.75e-07 53 24 4 188 3 nth Endonuclease III Mycobacterium leprae (strain TN)
Q92GH4 5.9e-07 53 25 2 130 3 nth Endonuclease III Rickettsia conorii (strain ATCC VR-613 / Malish 7)
O05956 7.28e-07 52 26 2 130 3 nth Endonuclease III Rickettsia prowazekii (strain Madrid E)
P57219 8.42e-07 52 29 2 127 3 nth Endonuclease III Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
B9DFZ0 9.99e-07 53 28 5 145 2 NTH2 Endonuclease III homolog 2, chloroplastic Arabidopsis thaliana
Q4UK93 1.23e-06 52 25 2 130 3 nth Endonuclease III Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
P54137 6.71e-06 50 25 6 175 1 nth-1 Endonuclease III homolog Caenorhabditis elegans
P0AB83 8.68e-06 49 27 3 129 1 nth Endonuclease III Escherichia coli (strain K12)
P0AB84 8.68e-06 49 27 3 129 3 nth Endonuclease III Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q68W04 9.25e-05 46 25 2 130 3 nth Endonuclease III Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q09907 0.001 44 21 6 197 1 nth1 Endonuclease III homolog Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12455
Feature type CDS
Gene mutY
Product A/G-specific adenine glycosylase
Location 73940 - 74977 (strand: 1)
Length 1038 (nucleotides) / 345 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1991
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00633 Helix-hairpin-helix motif
PF00730 HhH-GPD superfamily base excision DNA repair protein
PF10576 Iron-sulfur binding domain of endonuclease III
PF14815 NUDIX domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1194 Replication, recombination and repair (L) L Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03575 A/G-specific adenine glycosylase [EC:3.2.2.31] Base excision repair -

Protein Sequence

MDALQFSQSVLTWYHRYGRKTLPWQQEKSPYHVWLSEVMLQQTQVATVIPYFNRFIARFPAITDLAAAPTDEVLHLWTGLGYYARARNLHKAAQTIATEFGGQFPVTFEDVVALPGVGRSTAGAILSLSQNQHFPILDGNVKRVLARCYAIDGWPGKKDVENRLWDISTRVTPADGVQYFNQAMMDLGAMVCTRSKPKCDLCPLQSGCIAYAQHNPTAWPGKKPKKTIPEKTAYFLIMQQDNEIWLEKRPAKGIWGGLYSFPQFETEDALHEWLAQQHVRHTPLQQLIAFRHTFSHFHLDIVPVATNITDRTAVRDGSDGIWYNSQNPPAIGLAAPVDNLLKQIG

Flanking regions ( +/- flanking 50bp)

CAGTATGCTGGAATCCCAGACAATTAAAATTATTCAATAATTATATTCCAATGGATGCACTGCAATTTTCGCAATCAGTTCTGACGTGGTATCACCGCTACGGCAGAAAAACCCTGCCATGGCAGCAGGAAAAAAGCCCTTATCATGTCTGGCTCTCTGAAGTAATGCTGCAACAGACCCAGGTCGCAACGGTTATTCCGTATTTTAACCGCTTTATCGCCCGATTTCCGGCGATAACTGATTTAGCCGCTGCGCCAACGGATGAAGTGCTGCACCTGTGGACCGGTCTGGGTTATTACGCCCGCGCCCGTAACTTACATAAAGCAGCGCAGACTATCGCCACTGAGTTTGGCGGGCAGTTTCCGGTCACATTTGAGGATGTTGTTGCTCTCCCGGGTGTCGGGCGCTCAACAGCGGGTGCAATTTTATCATTATCGCAAAACCAGCATTTCCCGATTCTGGACGGTAACGTCAAGCGGGTGCTGGCGCGTTGCTATGCCATTGACGGCTGGCCGGGCAAAAAAGATGTCGAAAACCGGCTGTGGGATATTTCAACCCGCGTCACGCCGGCAGACGGTGTGCAGTATTTTAATCAGGCGATGATGGATTTGGGTGCGATGGTCTGCACCCGCAGCAAGCCAAAATGTGATTTGTGTCCGCTGCAAAGCGGCTGTATCGCCTATGCGCAGCATAATCCGACCGCCTGGCCGGGCAAAAAACCGAAAAAAACCATTCCGGAAAAAACAGCTTATTTTCTTATCATGCAACAGGATAATGAGATCTGGCTGGAAAAACGCCCCGCAAAAGGAATCTGGGGCGGGTTATACAGTTTTCCGCAATTTGAAACCGAAGATGCCCTGCATGAATGGCTGGCGCAACAGCATGTCCGCCATACTCCCCTGCAGCAACTGATTGCATTCCGTCATACATTCAGTCATTTTCATCTGGATATTGTTCCCGTTGCCACAAACATCACTGATCGCACTGCTGTCCGGGACGGCAGCGACGGGATTTGGTATAACAGCCAAAATCCACCGGCAATCGGCCTTGCCGCACCGGTGGACAACCTGCTAAAGCAAATCGGGTAAATACCCCATTTTTAAGGATGTTACATGAGCCGAACTATTTTTTGCACCTT