Homologs in group_2006

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15075 FBDBKF_15075 81.3 Morganella morganii S1 cxxC putative protein-disulfide isomerase, contains CxxC motif
EHELCC_11170 EHELCC_11170 81.3 Morganella morganii S2 cxxC putative protein-disulfide isomerase, contains CxxC motif
NLDBIP_11515 NLDBIP_11515 81.3 Morganella morganii S4 cxxC putative protein-disulfide isomerase, contains CxxC motif
LHKJJB_11375 LHKJJB_11375 81.3 Morganella morganii S3 cxxC putative protein-disulfide isomerase, contains CxxC motif
HKOGLL_09985 HKOGLL_09985 81.3 Morganella morganii S5 cxxC putative protein-disulfide isomerase, contains CxxC motif
PMI_RS01640 PMI_RS01640 42.2 Proteus mirabilis HI4320 - DsbA family protein

Distribution of the homologs in the orthogroup group_2006

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2006

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12375
Feature type CDS
Gene -
Product hypothetical protein
Location 61019 - 61630 (strand: 1)
Length 612 (nucleotides) / 203 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2006
Orthogroup size 7
N. genomes 7

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3531 Posttranslational modification, protein turnover, chaperones (O) O Predicted protein-disulfide isomerase, contains CxxC motif

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07396 putative protein-disulfide isomerase - -

Protein Sequence

MSVKILHYIYDPLCGWCYGIAPFIQAAHAQGVKIALHGGGMITGSQRRPVDDGLREMILNHNQRITQLTGQPFTDAYHALLKDREWVMDSVPPIAAILSAQSQSGKGIEMLDACQKAYYQDGLPLTKETLRKLAADLGIDDIQSDLAEQHINESRQLFVHQPAGGFPTLLLEENGVFQHIPNQAVLGGKSDWDTLIAQLKPTA

Flanking regions ( +/- flanking 50bp)

TCCTGAAAGGCGAAATGCAGTGGCCGCAGTAATCTGATAAGGAATGTTCTATGTCTGTAAAAATATTGCACTATATTTACGATCCGCTTTGCGGCTGGTGTTACGGAATTGCCCCGTTTATTCAGGCGGCACATGCACAAGGTGTAAAAATAGCCCTGCACGGCGGCGGTATGATCACCGGCTCTCAGCGCCGTCCTGTGGATGACGGTCTGCGTGAAATGATCCTGAACCACAATCAGCGCATCACCCAACTGACCGGGCAACCTTTCACTGATGCCTATCACGCCCTGCTGAAAGACAGAGAATGGGTGATGGATTCAGTGCCGCCGATTGCTGCCATACTCAGTGCGCAGTCTCAGTCAGGCAAAGGCATTGAGATGCTGGACGCCTGCCAGAAAGCGTATTATCAGGATGGTTTACCGCTGACAAAAGAGACACTGCGCAAACTGGCCGCGGATCTGGGTATTGATGATATACAGTCAGACCTGGCTGAGCAGCACATCAATGAAAGCCGTCAGTTATTTGTTCATCAGCCGGCAGGCGGATTCCCGACCCTGCTGCTTGAAGAGAACGGCGTCTTTCAGCACATCCCGAACCAGGCGGTTTTGGGCGGAAAATCCGATTGGGATACACTGATCGCGCAGTTAAAACCCACCGCCTGACATAATACTCATCACGATAATCATCCCTGCAATTAAATGCGGTCCGAACG