Homologs in group_393

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15100 FBDBKF_15100 84.6 Morganella morganii S1 fadH 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family
EHELCC_11145 EHELCC_11145 84.6 Morganella morganii S2 fadH 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family
NLDBIP_11490 NLDBIP_11490 84.6 Morganella morganii S4 fadH 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family
LHKJJB_11350 LHKJJB_11350 84.6 Morganella morganii S3 fadH 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family
HKOGLL_09960 HKOGLL_09960 84.6 Morganella morganii S5 fadH 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family
PMI_RS08290 PMI_RS08290 34.3 Proteus mirabilis HI4320 - NADH:flavin oxidoreductase/NADH oxidase
PMI_RS18420 PMI_RS18420 25.6 Proteus mirabilis HI4320 - NADPH-dependent 2,4-dienoyl-CoA reductase

Distribution of the homologs in the orthogroup group_393

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_393

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q97E86 4.44e-56 188 36 5 338 3 namA NADPH dehydrogenase Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q5KXG9 8.39e-46 161 33 7 316 1 namA NADPH dehydrogenase Geobacillus kaustophilus (strain HTA426)
P54550 3.72e-45 159 33 8 335 1 namA NADPH dehydrogenase Bacillus subtilis (strain 168)
A7Z6E7 5.93e-45 159 32 9 342 3 namA NADPH dehydrogenase Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q8Y4H1 2.35e-44 157 35 9 342 3 namA NADPH dehydrogenase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
A0ALF5 9.82e-44 155 34 8 341 3 namA NADPH dehydrogenase Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / CCUG 15529 / CIP 8149 / NCTC 11857 / SLCC 5334 / V8)
A4IQK7 1.51e-43 155 31 7 316 3 namA NADPH dehydrogenase Geobacillus thermodenitrificans (strain NG80-2)
Q71WV6 3.84e-43 154 35 9 342 3 namA NADPH dehydrogenase Listeria monocytogenes serotype 4b (strain F2365)
C1KYN8 3.84e-43 154 35 9 342 3 namA NADPH dehydrogenase Listeria monocytogenes serotype 4b (strain CLIP80459)
B8DBP0 5.01e-42 151 34 9 341 3 namA NADPH dehydrogenase Listeria monocytogenes serotype 4a (strain HCC23)
Q9KCT8 5.56e-42 151 32 7 336 3 namA NADPH dehydrogenase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
A7GNY4 7.74e-42 151 31 4 310 3 namA NADPH dehydrogenase Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
Q928C2 1.25e-41 150 34 9 341 3 namA NADPH dehydrogenase Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
C5D427 1.76e-41 150 30 5 314 3 namA NADPH dehydrogenase Geobacillus sp. (strain WCH70)
Q65HN9 1.94e-41 150 31 6 322 3 namA NADPH dehydrogenase Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
B7HJE9 9.29e-40 145 32 8 316 3 namA NADPH dehydrogenase Bacillus cereus (strain B4264)
Q81EF6 4.73e-39 144 32 8 316 3 namA NADPH dehydrogenase Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7ITF9 3.74e-38 141 31 7 314 3 namA NADPH dehydrogenase Bacillus cereus (strain G9842)
A8FEW4 2.79e-37 139 31 9 345 3 namA NADPH dehydrogenase Bacillus pumilus (strain SAFR-032)
B7HNI1 2.88e-37 139 29 8 336 3 namA NADPH dehydrogenase Bacillus cereus (strain AH187)
B9IY25 3.07e-37 139 29 8 336 3 namA NADPH dehydrogenase Bacillus cereus (strain Q1)
Q739N4 3.7e-37 139 29 8 336 3 namA NADPH dehydrogenase Bacillus cereus (strain ATCC 10987 / NRS 248)
Q63CC9 5.74e-37 138 29 7 314 3 namA NADPH dehydrogenase Bacillus cereus (strain ZK / E33L)
B7JKM7 1.16e-36 137 29 8 336 3 namA NADPH dehydrogenase Bacillus cereus (strain AH820)
A9VRT5 2.08e-36 136 29 7 314 3 namA NADPH dehydrogenase Bacillus mycoides (strain KBAB4)
Q6HJU1 3.06e-36 136 29 8 336 3 namA NADPH dehydrogenase Bacillus thuringiensis subsp. konkukian (strain 97-27)
C1ERH2 3.5e-36 136 29 8 336 3 namA NADPH dehydrogenase Bacillus cereus (strain 03BB102)
A0RD27 3.5e-36 136 29 8 336 3 namA NADPH dehydrogenase Bacillus thuringiensis (strain Al Hakam)
Q81RK6 7.27e-36 135 29 7 314 3 namA NADPH dehydrogenase Bacillus anthracis
C3L5F3 7.27e-36 135 29 7 314 3 namA NADPH dehydrogenase Bacillus anthracis (strain CDC 684 / NRRL 3495)
C3P7Z9 7.27e-36 135 29 7 314 3 namA NADPH dehydrogenase Bacillus anthracis (strain A0248)
B8G5D6 3.8e-34 130 29 7 351 1 Cagg_2779 NADPH dehydrogenase Chloroflexus aggregans (strain MD-66 / DSM 9485)
B8N8Q9 5.88e-33 129 32 11 348 1 afvA NADPH dehydrogenase afvA Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167)
I1RV17 1.74e-31 125 27 7 347 2 FG08077 NADH:flavin oxidoreductase FG08077 Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1)
P19410 3.64e-29 120 28 8 316 1 baiCD 3-oxocholoyl-CoA 4-desaturase Clostridium scindens (strain JCM 10418 / VPI 12708)
P32382 3.15e-25 109 28 11 319 1 None NADH oxidase Thermoanaerobacter brockii
O94467 4.19e-25 107 26 8 340 3 SPBC23G7.10c Putative NADPH dehydrogenase C23G7.10c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0DW92 2.49e-24 107 28 7 314 1 ard NADH:acrylate oxidoreductase Vibrio harveyi
A4J778 1.63e-18 89 28 11 344 1 Dred_2421 Metal reductase Desulforamulus reducens (strain ATCC BAA-1160 / DSM 100696 / MI-1)
P54524 6.56e-18 86 24 10 330 3 yqiG Probable NADH-dependent flavin oxidoreductase YqiG Bacillus subtilis (strain 168)
Q69TH4 2.68e-17 85 25 10 346 3 OPR2 Putative 12-oxophytodienoate reductase 2 Oryza sativa subsp. japonica
Q84QK0 1.46e-15 80 25 11 349 1 OPR1 12-oxophytodienoate reductase 1 Oryza sativa subsp. japonica
Q69TH6 7.31e-15 77 25 8 327 3 OPR3 Putative 12-oxophytodienoate reductase 3 Oryza sativa subsp. japonica
P42593 1.99e-14 77 28 6 231 1 fadH 2,4-dienoyl-CoA reductase [(2E)-enoyl-CoA-producing] Escherichia coli (strain K12)
B9FFD2 3.71e-14 75 25 11 337 2 OPR12 Putative 12-oxophytodienoate reductase 12 Oryza sativa subsp. japonica
P0DN73 7.43e-13 72 24 10 322 1 SpyM50865 Uncharacterized oxidoreductase SpyM50865 Streptococcus pyogenes serotype M5 (strain Manfredo)
Q69TH8 8.93e-13 71 23 11 332 2 OPR4 Putative 12-oxophytodienoate reductase 4 Oryza sativa subsp. japonica
Q69TI0 1.04e-12 71 23 10 346 2 OPR5 Putative 12-oxophytodienoate reductase 5 Oryza sativa subsp. japonica
B5XRB0 1.16e-12 72 25 12 334 1 KPK_2907 NADH:fumarate oxidoreductase Klebsiella pneumoniae (strain 342)
P32370 1.99e-12 71 23 9 327 1 baiH 7-beta-hydroxy-3-oxochol-24-oyl-CoA 4-desaturase Clostridium scindens (strain JCM 10418 / VPI 12708)
A8C7R3 3.53e-12 70 23 13 332 3 easA Probable inactive dehydrogenase easA Claviceps fusiformis
P16099 6.57e-12 69 25 10 325 1 tmd Trimethylamine dehydrogenase Methylophilus methylotrophus
Q6Z965 7.38e-12 68 22 9 362 1 OPR7 12-oxophytodienoate reductase 7 Oryza sativa subsp. japonica
Q0E0C6 1.1e-11 68 21 7 347 2 OPR8 Putative 12-oxophytodienoate reductase 8 Oryza sativa subsp. japonica
B9FSC8 1.13e-11 68 24 12 349 2 OPR11 Putative 12-oxophytodienoate reductase 11 Oryza sativa subsp. japonica
Q69TI2 1.24e-11 68 25 10 323 2 OPR6 Putative 12-oxophytodienoate reductase 6 Oryza sativa subsp. japonica
Q9FEW9 1.32e-11 68 21 10 362 1 OPR3 12-oxophytodienoate reductase 3 Solanum lycopersicum
Q1QYW1 1.37e-11 68 24 7 249 1 ddhC N,N-dimethylglycine/sarcosine dehydrogenase Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11)
B9FFD3 1.69e-11 67 22 10 347 2 OPR13 Putative 12-oxophytodienoate reductase 13 Oryza sativa subsp. japonica
A2TBU0 2.05e-11 67 26 4 190 2 easA Probable inactive reductase easA Epichloe festucae var. lolii
M1W0Y0 3.66e-11 67 23 12 331 3 easA Probable inactive dehydrogenase easA Claviceps purpurea (strain 20.1)
Q9XG54 3.78e-11 67 24 9 332 1 OPR1 12-oxophytodienoate reductase 1 Solanum lycopersicum
A0A829NF98 5.74e-11 67 23 12 339 1 bilR Bilirubin reductase Mediterraneibacter gnavus (strain CC55_001C)
Q6ZXC1 7.23e-11 65 23 12 331 3 easA Probable inactive dehydrogenase easA Claviceps purpurea
P43084 7.85e-11 65 26 4 197 1 EBP1 Probable NADPH dehydrogenase Candida albicans
A0A1D8PPK1 9.01e-11 65 26 4 197 2 EBP1 Probable NADPH dehydrogenase Candida albicans (strain SC5314 / ATCC MYA-2876)
Q8LAH7 1.41e-10 65 24 10 347 1 OPR1 12-oxophytodienoate reductase 1 Arabidopsis thaliana
P77258 2.33e-10 64 25 11 296 1 nemA N-ethylmaleimide reductase Escherichia coli (strain K12)
W6Q9S9 2.89e-10 64 25 11 334 1 fgaOx3 Chanoclavine-I aldehyde reductase fgaOx3 Penicillium roqueforti (strain FM164)
Q9FUP0 2.99e-10 64 21 10 361 1 OPR3 12-oxophytodienoate reductase 3 Arabidopsis thaliana
Q8GYB8 5.49e-10 63 23 10 343 1 OPR2 12-oxophytodienoate reductase 2 Arabidopsis thaliana
C5H429 9.92e-10 62 20 8 348 1 DBR2 Artemisinic aldehyde Delta(11(13)) reductase Artemisia annua
P41816 1.16e-09 62 27 4 200 1 OYE3 NADPH dehydrogenase 3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
B8NWW6 1.29e-09 62 23 13 321 3 lnbE NADP-dependent oxidoreductase lnbE Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167)
A0A0N9HP11 1.73e-09 62 23 12 314 1 nox 4,4'-dithiodibutanoate disulfide reductase Rhodococcus erythropolis
Q9FEX0 1.74e-09 61 24 10 319 2 OPR2 12-oxophytodienoate reductase-like protein Solanum lycopersicum
O87278 3.46e-09 61 22 8 349 2 stcD Probable N-methylproline demethylase Rhizobium meliloti (strain 1021)
P0DO34 4.33e-09 61 22 8 274 3 iliE NADH-dependent flavin oxidoreductase iliE Neonectria sp. (strain DH2)
W6Q2D7 4.42e-09 60 22 9 343 3 ifgGI Chanoclavine-I aldehyde reductase ifgG Penicillium roqueforti (strain FM164)
A0A1U8QTA2 6.97e-09 60 22 9 361 2 hxnT Flavin oxidoreductase hxnT Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q02899 1.78e-08 58 25 4 200 1 OYE1 NADPH dehydrogenase 1 Saccharomyces pastorianus
A0A482NAR8 2.1e-08 58 22 10 307 3 iccG NADH-dependent flavin oxidoreductase iccG Talaromyces variabilis
Q8GYA3 2.12e-08 58 23 8 313 2 At1g09400 Putative 12-oxophytodienoate reductase-like protein 1 Arabidopsis thaliana
P0DI09 2.8e-08 57 25 5 192 3 At1g18020 Putative 12-oxophytodienoate reductase-like protein 2B Arabidopsis thaliana
P0DI08 2.8e-08 57 25 5 192 2 At1g17990 Putative 12-oxophytodienoate reductase-like protein 2A Arabidopsis thaliana
Q48303 7.8e-08 57 23 8 296 3 dmd Dimethylamine dehydrogenase Hyphomicrobium sp. (strain x)
A0A482N8M8 9.42e-08 56 23 10 275 1 iccE NADH-dependent flavin oxidoreductase iccE Talaromyces variabilis
E9AGH7 1.23e-07 56 25 8 244 1 LINJ.12.0730 Probable flavin mononucleotide-dependent alkene reductase Leishmania infantum
Q6UEF0 1.32e-07 56 34 1 97 2 nadA NADH-dependent flavin oxidoreductase nadA Aspergillus parasiticus (strain ATCC 56775 / NRRL 5862 / SRRC 143 / SU-1)
P0DXD0 1.98e-07 55 20 10 340 1 bilR Bilirubin reductase Clostridioides difficile (strain CD3)
Q0JMR0 3e-07 54 27 9 209 2 OPR10 Putative 12-oxophytodienoate reductase 10 Oryza sativa subsp. japonica
Q4WZ70 3.62e-07 54 21 11 346 1 easA Chanoclavine-I aldehyde reductase easA Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
Q03558 1.55e-06 52 24 5 201 1 OYE2 NADPH dehydrogenase 2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
G0REX8 2.1e-06 52 21 8 225 3 iliE NADH-dependent flavin oxidoreductase iliE Hypocrea jecorina (strain QM6a)
G9F1Y9 5.84e-06 51 22 15 366 1 fldZ Cinnamate reductase Clostridium sporogenes (strain ATCC 7955 / DSM 767 / NBRC 16411 / NCIMB 8053 / NCTC 8594 / PA 3679)
P40952 9.76e-06 50 24 2 148 1 KYE1 Enoate reductase 1 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12350
Feature type CDS
Gene -
Product tRNA-dihydrouridine synthase
Location 55212 - 56171 (strand: -1)
Length 960 (nucleotides) / 319 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_393
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00724 NADH:flavin oxidoreductase / NADH oxidase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1902 Energy production and conversion (C) C 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family

Protein Sequence

MNLMQPFVSEKLILKNKLVYPPIRIKRATDGYANYFHLAHYMSFAVGQVGLIIMEECAVAADARLGSGALGLYKDDHAIMLKQIVGMLQNEGSKVAIQLNHAGNKSRLESDGIIQDINALTQDDIIELFACYTRAAERAVAAGFDALEIMASHEFLISQFIDRRTNQRTDKYADPVIFLTELLMAVRAVWREDKAIILRVGTRYCEDNSILFTQNILNNINHLIDIVHISNGGNRMHGTNKGIAYQLDDTREIKKQCKKPVIVVGGIHDHQLADEILEHQYADLIAVGRGLLRNPNWFLEYLFKYDRKLIPRPYIRAFR

Flanking regions ( +/- flanking 50bp)

GATTATTATCATTTTATTTCTGTATAGGTGATCCGGGAAGCGGACTTATTATGAATTTAATGCAGCCATTTGTATCAGAAAAATTAATACTTAAAAATAAACTGGTTTATCCACCGATCAGAATAAAACGGGCAACTGACGGCTACGCTAATTATTTTCATCTGGCACATTATATGTCTTTTGCGGTAGGTCAGGTCGGACTGATTATAATGGAGGAGTGCGCGGTAGCCGCTGATGCGCGTCTGGGAAGCGGGGCGCTGGGATTATATAAAGATGACCATGCCATTATGCTGAAGCAGATTGTGGGTATGCTTCAAAATGAAGGCAGCAAGGTCGCTATTCAGCTTAACCATGCAGGGAATAAATCGCGTCTGGAATCTGACGGTATTATTCAGGATATTAACGCATTAACACAGGATGATATCATTGAGTTATTTGCCTGTTATACCCGAGCTGCGGAGCGGGCGGTGGCTGCGGGGTTTGATGCCCTTGAAATCATGGCATCCCATGAATTTTTAATTTCGCAGTTTATTGACCGCCGGACAAATCAGCGGACAGATAAATATGCAGATCCGGTAATTTTTCTGACAGAGTTACTGATGGCTGTCAGAGCGGTATGGCGGGAAGATAAAGCGATTATTCTCCGGGTCGGGACGCGTTATTGTGAAGATAACAGTATTTTATTTACTCAAAATATTTTAAATAATATTAATCACCTTATCGATATTGTACATATTTCAAACGGCGGAAACCGTATGCACGGTACAAATAAAGGCATTGCTTATCAACTGGATGATACCCGGGAAATAAAAAAACAGTGTAAAAAACCGGTTATTGTTGTGGGTGGAATTCATGACCATCAATTAGCAGATGAAATACTGGAACATCAGTATGCTGATTTAATTGCGGTAGGTCGCGGGTTATTACGTAACCCTAACTGGTTCCTTGAATATCTGTTTAAGTATGATCGAAAACTGATCCCGCGTCCTTATATCCGCGCGTTTCGCTGACATAAAGAATAAAAATGATGAAGGGGGATTAAGGGATGATGAAAGCAGCA