Homologs in group_2020

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15160 FBDBKF_15160 88.1 Morganella morganii S1 apbE FAD:protein FMN transferase ApbE
EHELCC_11085 EHELCC_11085 88.1 Morganella morganii S2 apbE FAD:protein FMN transferase ApbE
NLDBIP_11430 NLDBIP_11430 88.1 Morganella morganii S4 apbE FAD:protein FMN transferase ApbE
LHKJJB_11290 LHKJJB_11290 88.1 Morganella morganii S3 apbE FAD:protein FMN transferase ApbE
HKOGLL_09900 HKOGLL_09900 88.1 Morganella morganii S5 apbE FAD:protein FMN transferase ApbE
PMI_RS01715 PMI_RS01715 73.5 Proteus mirabilis HI4320 - FAD:protein FMN transferase

Distribution of the homologs in the orthogroup group_2020

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2020

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A5F5Y3 3.92e-142 408 62 2 316 1 apbE FAD:protein FMN transferase Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P44550 2.91e-120 353 51 4 337 3 apbE FAD:protein FMN transferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P41780 1.13e-91 280 42 6 349 1 apbE FAD:protein FMN transferase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AB85 3.02e-90 277 41 6 343 1 apbE FAD:protein FMN transferase Escherichia coli (strain K12)
P0AB86 3.02e-90 277 41 6 343 3 apbE FAD:protein FMN transferase Escherichia coli O157:H7
B5XP00 1.62e-86 267 40 5 342 3 apbE1 FAD:protein FMN transferase Klebsiella pneumoniae (strain 342)
O85292 1.96e-57 192 33 5 321 3 apbE FAD:protein FMN transferase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AP6 1.28e-46 164 30 6 342 3 apbE FAD:protein FMN transferase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
O84080 1.6e-34 132 27 8 321 3 apbE FAD:protein FMN transferase Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9PKW2 2.77e-34 131 27 8 322 3 apbE FAD:protein FMN transferase Chlamydia muridarum (strain MoPn / Nigg)
Q9Z8K2 1.35e-31 124 27 10 324 3 apbE FAD:protein FMN transferase Chlamydia pneumoniae
B5XRA9 4.15e-29 117 28 6 281 3 apbE2 FAD:protein FMN transferase Klebsiella pneumoniae (strain 342)
Q52718 1.15e-26 113 28 8 273 3 rnfF FAD:protein FMN transferase Rhodobacter capsulatus
O83774 1.28e-21 97 23 9 321 1 apbE FAD:protein FMN transferase Treponema pallidum (strain Nichols)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12285
Feature type CDS
Gene -
Product FAD:protein FMN transferase
Location 40944 - 41984 (strand: -1)
Length 1041 (nucleotides) / 346 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2020
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02424 ApbE family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1477 Coenzyme transport and metabolism (H)
Posttranslational modification, protein turnover, chaperones (O)		 HO FAD:protein FMN transferase ApbE

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03734 FAD:protein FMN transferase [EC:2.7.1.180] - -

Protein Sequence

MVNIKWASLSAVILAVLFLSACGDEKEQTKQVTLNGKTMGTYYAIKYVAEPDSAAAESLQKGIDVVLEEVNDQMSTYRPDSELSRFNLSREINTPFPVSAATAKVVSEAIRINKLTQGALDVTVGPLVNLWGFGPEGRLTHVPSDEDIETRRQWTGIDKLRVEGNNLIKTVPELYVDLSSIAKGYGVDAVAEYLESQNIHNYMVDVGGEVRTQGINGKGKPWRIAIEKPSAQGLSQSAQEIIEPGNASVATSGDYRNYFEENNIRYSHTIDPKTARPINHNLVSITVIADNCMSADGFSTGLNVLGPERGLAVANEQHIPVFMIVKTENGFEERYSETFKPYLRKN

Flanking regions ( +/- flanking 50bp)

TGCGCCCACAAATGTGGGCGCATATGATCTGAAATCAGACTGGATTGTATATGGTAAATATTAAATGGGCTTCCCTGTCAGCAGTAATACTCGCAGTATTATTTCTGAGTGCCTGTGGCGATGAAAAAGAGCAGACAAAGCAAGTTACCCTGAACGGCAAAACAATGGGAACTTATTACGCGATAAAATATGTGGCGGAGCCGGATAGCGCGGCGGCTGAATCACTGCAAAAAGGGATAGATGTGGTGCTGGAAGAAGTGAACGACCAGATGTCCACTTACCGCCCTGACTCTGAACTCAGTCGTTTTAATCTCAGCCGTGAGATTAATACCCCGTTCCCTGTGTCTGCCGCGACGGCAAAAGTTGTCAGTGAAGCAATCCGTATCAATAAACTGACGCAAGGCGCTTTGGATGTCACTGTCGGACCGCTGGTTAATTTGTGGGGATTTGGTCCGGAAGGACGCCTGACACATGTACCGTCTGATGAGGATATTGAAACCCGCCGTCAGTGGACCGGCATTGATAAATTACGGGTTGAGGGCAATAACCTGATTAAAACTGTGCCTGAGCTGTATGTGGATCTTTCATCCATTGCAAAAGGGTATGGTGTGGATGCGGTTGCGGAGTACCTGGAATCACAGAATATTCATAATTATATGGTGGATGTGGGCGGTGAAGTCCGGACACAGGGTATTAACGGCAAAGGCAAACCATGGCGCATTGCGATTGAGAAACCTTCTGCACAGGGGCTGAGTCAGTCCGCACAGGAAATTATTGAGCCGGGTAATGCGTCGGTTGCAACATCAGGTGATTACCGGAATTATTTTGAAGAAAATAATATCCGCTATTCTCATACTATCGATCCGAAAACCGCACGACCGATTAATCATAATCTGGTATCGATTACGGTTATTGCTGATAACTGCATGAGTGCAGACGGCTTTTCTACCGGATTGAATGTCCTGGGACCAGAGCGCGGTCTGGCGGTGGCAAATGAACAACATATTCCTGTTTTTATGATTGTTAAAACGGAAAACGGTTTTGAAGAGCGCTACAGCGAAACATTTAAGCCGTATCTCAGAAAAAATTAAGAGGAGGGGTCGATATGATCAAAGTCTTTGTCGCAACCTTTATTCTGTTC