Homologs in group_2051

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15365 FBDBKF_15365 80.6 Morganella morganii S1 yfiH purine nucleoside phosphorylase YfiH
EHELCC_10880 EHELCC_10880 80.6 Morganella morganii S2 yfiH purine nucleoside phosphorylase YfiH
NLDBIP_11225 NLDBIP_11225 80.6 Morganella morganii S4 yfiH purine nucleoside phosphorylase YfiH
LHKJJB_11085 LHKJJB_11085 80.6 Morganella morganii S3 yfiH purine nucleoside phosphorylase YfiH
HKOGLL_09695 HKOGLL_09695 80.6 Morganella morganii S5 yfiH purine nucleoside phosphorylase YfiH
PMI_RS01915 PMI_RS01915 60.1 Proteus mirabilis HI4320 yfiH purine nucleoside phosphorylase YfiH

Distribution of the homologs in the orthogroup group_2051

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2051

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A384KG77 1.33e-106 311 61 0 242 1 yfiH Purine nucleoside phosphorylase YfiH Shigella flexneri
P33644 5.69e-106 309 61 0 242 1 yfiH Purine nucleoside phosphorylase YfiH Escherichia coli (strain K12)
P44552 3.32e-86 259 51 2 241 3 HI_0175 Purine nucleoside phosphorylase HI_0175 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P33663 3.04e-85 257 54 3 244 3 PA4543 Purine nucleoside phosphorylase PA4543 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q87AR8 1.21e-69 218 49 6 252 3 PD_1754 Purine nucleoside phosphorylase PD_1754 Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PET8 4.04e-69 216 49 5 251 3 XF_0940 Purine nucleoside phosphorylase XF_0940 Xylella fastidiosa (strain 9a5c)
P94338 2.74e-34 126 37 6 230 3 Cgl2154 Purine nucleoside phosphorylase Cgl2154/cg2365 Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P45496 3.69e-32 121 38 6 242 3 None Purine nucleoside phosphorylase ORF3 Streptomyces griseus
P45497 5.07e-32 120 41 6 229 3 SCO2081 Purine nucleoside phosphorylase SCO2081 Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P9WKD5 5.35e-32 120 40 7 240 1 Rv2149c Purine nucleoside phosphorylase Rv2149c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WKD4 5.35e-32 120 40 7 240 3 MT2208 Purine nucleoside phosphorylase MT2208 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P67257 5.35e-32 120 40 7 240 3 BQ2027_MB2173C Purine nucleoside phosphorylase BQ2027_MB2173C Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9RT03 4.55e-29 113 38 8 242 3 DR_1966 Purine nucleoside phosphorylase DR_1966 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P84138 1.32e-28 112 35 9 253 1 ylmD Purine nucleoside phosphorylase YlmD Geobacillus stearothermophilus (strain DSM 13240 / CIP 106956 / 10)
O31726 2.81e-28 112 33 10 267 3 ylmD Purine nucleoside phosphorylase YlmD Bacillus subtilis (strain 168)
Q92HU9 9.06e-25 101 30 2 166 3 RC0672 Purine nucleoside phosphorylase RC0672 Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q9ZD53 8.7e-23 96 29 2 166 3 RP494 Purine nucleoside phosphorylase RP494 Rickettsia prowazekii (strain Madrid E)
Q49WW9 2.11e-21 93 27 6 235 3 SSP1584 Purine nucleoside phosphorylase SSP1584 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q89ZI8 4.26e-20 89 31 9 254 1 BT_4389 Purine nucleoside phosphorylase BT_4389 Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Q4L5N8 6.94e-20 89 27 8 247 3 SH1728 Purine nucleoside phosphorylase SH1728 Staphylococcus haemolyticus (strain JCSC1435)
Q9CCE3 2.16e-18 84 32 9 241 3 ML0918 Purine nucleoside phosphorylase ML0918 Mycobacterium leprae (strain TN)
Q7A617 2.61e-18 84 27 7 236 3 SA1030 Purine nucleoside phosphorylase SA1030 Staphylococcus aureus (strain N315)
Q99US8 2.61e-18 84 27 7 236 3 SAV1187 Purine nucleoside phosphorylase SAV1187 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q8CSX5 5.48e-18 84 25 6 253 3 SE_0862 Purine nucleoside phosphorylase SE_0862 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q9ZHA4 6.85e-18 83 27 7 236 3 ylmD Purine nucleoside phosphorylase YlmD Staphylococcus aureus
Q6GHP8 6.85e-18 83 27 7 236 3 SAR1163 Purine nucleoside phosphorylase SAR1163 Staphylococcus aureus (strain MRSA252)
Q5HQ05 7.51e-18 83 25 6 253 3 SERP0752 Purine nucleoside phosphorylase SERP0752 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q8NX32 9.39e-18 83 27 7 236 3 MW1070 Purine nucleoside phosphorylase MW1070 Staphylococcus aureus (strain MW2)
Q6GA25 9.39e-18 83 27 7 236 3 SAS1121 Purine nucleoside phosphorylase SAS1121 Staphylococcus aureus (strain MSSA476)
Q5HGP4 2.81e-17 82 27 7 236 3 SACOL1200 Purine nucleoside phosphorylase SACOL1200 Staphylococcus aureus (strain COL)
O66554 3.82e-16 77 30 8 213 3 aq_167 Purine nucleoside phosphorylase aq_167 Aquifex aeolicus (strain VF5)
P33664 4.69e-15 75 28 6 189 3 CA_C1699 Purine nucleoside phosphorylase CA_C1699 Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q1EIR0 7.68e-15 75 32 8 234 1 rl5 Adenosine deaminase RL5 Unknown prokaryotic organism
Q8IV20 1.54e-13 73 27 7 242 1 LACC1 Purine nucleoside phosphorylase LACC1 Homo sapiens
Q9PN78 2.18e-13 70 24 10 234 3 Cj1217c Purine nucleoside phosphorylase Cj1217c Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q8BZT9 3.44e-11 66 27 9 250 1 Lacc1 Purine nucleoside phosphorylase LACC1 Mus musculus
P74606 1.84e-09 60 29 7 196 3 slr1573 Purine nucleoside phosphorylase slr1573 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12090
Feature type CDS
Gene yfiH
Product purine nucleoside phosphorylase YfiH
Location 3239 - 4006 (strand: -1)
Length 768 (nucleotides) / 255 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2051
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02578 Multi-copper polyphenol oxidoreductase laccase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1496 Inorganic ion transport and metabolism (P) P Copper oxidase (laccase) domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05810 purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] Purine metabolism
Cysteine and methionine metabolism
Metabolic pathways
Nucleotide metabolism		 Methionine salvage pathway
Adenine ribonucleotide degradation, AMP => Urate
Guanine ribonucleotide degradation, GMP => Urate

Protein Sequence

MTTLLTPEWPVPSQVAACSTLRRGGVSQPPFDSLNLGLHVGDSPADVARNREILAMSAGFPDTPFWLNQVHGTAVAVLDNTTPPGPEADAVYTRTPGKVCAIMTADCLPVLFCARDGREVAGAHAGWRGLCEGVLESTLACFSAAPSEIMAWLGPAIGPQRFEVGAEVREAFIAHSPQAASAFIPRGDKYLADIYGLARQRLEQQGVTAIYGGTECTVSDPARFFSYRRDARTGRMASFIWITQPHQSSVISYQS

Flanking regions ( +/- flanking 50bp)

AAGCTGACGCACAAGCCCATCAGGATGATATGGACTGGTAAGGAGTCACAATGACCACACTGCTCACCCCTGAATGGCCGGTACCTTCACAGGTTGCCGCATGCAGCACATTACGGCGGGGCGGTGTCAGTCAGCCACCGTTTGACAGCTTAAACCTGGGGTTGCATGTCGGTGATTCGCCCGCAGATGTTGCCCGTAACCGGGAGATCCTGGCGATGTCCGCCGGGTTTCCTGATACGCCGTTCTGGCTTAATCAGGTTCACGGCACAGCGGTTGCGGTATTAGATAACACCACACCGCCCGGGCCTGAAGCAGATGCGGTGTATACCCGTACGCCGGGCAAGGTGTGTGCCATTATGACAGCTGATTGCCTGCCGGTACTGTTTTGTGCCCGTGACGGGCGCGAAGTTGCCGGTGCGCATGCCGGCTGGCGTGGTTTGTGTGAGGGTGTGCTGGAAAGCACGCTCGCCTGTTTTTCTGCCGCGCCATCAGAGATTATGGCGTGGCTGGGACCGGCTATCGGTCCGCAGCGGTTTGAAGTGGGTGCTGAAGTGCGTGAGGCATTTATCGCGCACTCTCCGCAGGCTGCTTCTGCTTTTATTCCCCGTGGTGATAAATACCTCGCGGATATTTACGGGCTTGCCCGTCAGCGTCTTGAACAACAGGGCGTGACAGCTATTTACGGCGGCACTGAATGTACTGTCAGTGACCCGGCGCGTTTTTTCTCTTACCGCCGTGATGCCCGCACCGGACGAATGGCGTCTTTTATCTGGATTACCCAGCCTCATCAGTCATCAGTTATCAGTTATCAGTCATAACGTTTCAGATTACACATAATATTTACTATTTTTTCGAAAACCGGCTTGAA