Homologs in group_4148

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4148

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4148

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8G0E4 5.55e-05 44 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella suis biovar 1 (strain 1330)
B0CGV0 5.55e-05 44 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella suis (strain ATCC 23445 / NCTC 10510)
A5VQS4 5.55e-05 44 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
A9M5G5 5.55e-05 44 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella canis (strain ATCC 23365 / NCTC 10854 / RM-666)
P0C104 6.14e-05 44 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella abortus biovar 1 (strain 9-941)
Q2YRQ4 6.14e-05 44 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella abortus (strain 2308)
B2S602 6.14e-05 44 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella abortus (strain S19)
Q8YHG9 7.43e-05 43 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
C0RJC1 7.43e-05 43 24 4 142 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Brucella melitensis biotype 2 (strain ATCC 23457)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12005
Feature type CDS
Gene -
Product 3-hydroxy-fatty acyl-ACP dehydratase
Location 555421 - 555897 (strand: 1)
Length 477 (nucleotides) / 158 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4148
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF22817 ApeP dehydratase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4706 Lipid transport and metabolism (I) I Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain

Protein Sequence

MIYDKPAAYLPHSAPMVLLESVISVEPESARCDVVVTAPGVLGRFLDKNGNLPGWYAIELLAQTVGVWSGWHQQQNQVSQPAVGLLLGGRGIKCSCPAFPAGARLSVTVRLQLKDDNIGSFEGEISAGDISLATGRITTYQPAFDELTALFQRDCYCH

Flanking regions ( +/- flanking 50bp)

GTTTGCATTCGGTGGCAATAACTGTGCTCTGATATTTGCAGGAGTGACGCATGATATATGATAAACCGGCGGCGTATCTGCCGCATTCGGCACCCATGGTACTGCTGGAAAGCGTTATCAGCGTGGAGCCGGAAAGTGCCCGGTGTGATGTTGTTGTCACAGCACCGGGCGTGCTCGGGCGGTTTCTTGATAAAAACGGGAACCTGCCCGGATGGTATGCTATTGAATTGCTGGCTCAGACAGTCGGCGTCTGGTCCGGCTGGCACCAGCAGCAGAATCAGGTTTCTCAGCCTGCGGTGGGACTGCTTCTCGGCGGGCGCGGAATTAAATGTAGCTGTCCGGCATTTCCGGCAGGTGCGCGTTTATCAGTAACGGTCAGGCTTCAGTTAAAAGATGACAATATCGGCAGCTTTGAGGGCGAGATAAGTGCGGGAGATATCAGCCTGGCGACCGGGCGGATCACCACTTATCAGCCCGCATTTGATGAGCTGACAGCGCTTTTCCAGCGCGATTGTTACTGTCATTAATAAGAAAAAACAGTTAATTAAATCAACACAGTCAATTAAACCAAAAGACA