Homologs in group_180

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05955 FBDBKF_05955 28.0 Morganella morganii S1 fabZ 3-hydroxyacyl-ACP dehydratase FabZ
EHELCC_09000 EHELCC_09000 28.0 Morganella morganii S2 fabZ 3-hydroxyacyl-ACP dehydratase FabZ
NLDBIP_09380 NLDBIP_09380 28.0 Morganella morganii S4 fabZ 3-hydroxyacyl-ACP dehydratase FabZ
LHKJJB_08375 LHKJJB_08375 28.0 Morganella morganii S3 fabZ 3-hydroxyacyl-ACP dehydratase FabZ
HKOGLL_07925 HKOGLL_07925 28.0 Morganella morganii S5 fabZ 3-hydroxyacyl-ACP dehydratase FabZ
F4V73_RS15940 F4V73_RS15940 28.0 Morganella psychrotolerans fabZ 3-hydroxyacyl-ACP dehydratase FabZ
PMI_RS11230 PMI_RS11230 27.1 Proteus mirabilis HI4320 fabZ 3-hydroxyacyl-ACP dehydratase FabZ
PMI_RS14390 PMI_RS14390 22.5 Proteus mirabilis HI4320 - 3-hydroxyacyl-ACP dehydratase FabZ family protein

Distribution of the homologs in the orthogroup group_180

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_180

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q04DN4 3.11e-07 49 27 2 113 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Oenococcus oeni (strain ATCC BAA-331 / PSU-1)
Q39T45 4.38e-05 43 33 3 75 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)
B9JX24 4.69e-05 43 24 2 111 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Allorhizobium ampelinum (strain ATCC BAA-846 / DSM 112012 / S4)
Q2G8K0 5.22e-05 43 31 2 86 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199)
P61453 5.73e-05 43 31 1 67 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
Q3A902 6.67e-05 43 28 3 85 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901)
A8YXS1 0.000109 42 25 1 100 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Lactobacillus helveticus (strain DPC 4571)
Q8DI01 0.000174 42 26 4 107 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
C3MBR1 0.000262 41 27 3 87 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
A6LSC8 0.000327 41 26 1 69 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
Q0BTL1 0.000365 41 33 3 86 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
B3Q7J4 0.000405 40 30 3 89 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Rhodopseudomonas palustris (strain TIE-1)
P61454 0.000405 40 30 3 89 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Q2NBT4 0.000544 40 24 3 110 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Erythrobacter litoralis (strain HTCC2594)
B8DJ60 0.000567 40 30 4 109 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Nitratidesulfovibrio vulgaris (strain DSM 19637 / Miyazaki F)
A5UXY2 0.000593 40 28 1 67 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Roseiflexus sp. (strain RS-1)
Q2GFC5 0.000599 40 25 3 106 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas)
Q47F81 0.000692 40 27 6 113 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Dechloromonas aromatica (strain RCB)
Q1IV59 0.000701 40 31 3 79 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Koribacter versatilis (strain Ellin345)
Q4KHG5 0.000776 40 27 3 91 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q312H2 0.000801 40 26 3 118 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Oleidesulfovibrio alaskensis (strain ATCC BAA-1058 / DSM 17464 / G20)
Q3KHA1 0.000859 40 27 3 91 3 fabZ 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Pseudomonas fluorescens (strain Pf0-1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11970
Feature type CDS
Gene -
Product hypothetical protein
Location 548270 - 548629 (strand: 1)
Length 360 (nucleotides) / 119 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_180
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF22818 ApeI dehydratase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0764 Lipid transport and metabolism (I) I 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase

Protein Sequence

MLPVEKTHSLTGPDALSVTLTIPPSLSWFEGHFDSQPVLPGVAQIEWAIHYAARYLNVNAAFSSLEQVKFLSPILPQDEVTLLLTWDAQLQKLQFRYHAFPSADAEPVLMSSGKIRLCP

Flanking regions ( +/- flanking 50bp)

GTTAAATCCGCAGAGCAAACGATCATGGTCGGTATTACAGGAGTTATTTAATGTTACCGGTTGAAAAAACGCACTCATTAACAGGTCCGGATGCGCTGAGCGTAACACTGACTATTCCGCCATCCCTTTCCTGGTTTGAGGGACATTTTGATTCTCAGCCGGTGTTACCCGGCGTGGCGCAAATTGAATGGGCAATACATTATGCGGCGCGCTATCTCAATGTTAATGCCGCATTTTCATCACTGGAACAGGTGAAGTTTTTATCGCCCATTCTGCCGCAGGATGAGGTCACGCTGCTGCTGACATGGGATGCACAACTGCAAAAATTACAGTTCCGTTATCACGCCTTTCCGTCAGCGGATGCGGAACCGGTACTGATGAGCAGCGGGAAAATCCGGTTATGTCCTTAATTCTTTCTGCCGGGATCTCTGTTGCGCCTGCGCTGTTTAAGCCCTGTGCA