Homologs in group_4130

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4130

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4130

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64451 8.52e-38 134 31 2 202 3 ydcL Uncharacterized lipoprotein YdcL Escherichia coli (strain K12)
P64452 8.52e-38 134 31 2 202 3 ydcL Uncharacterized lipoprotein YdcL Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11290
Feature type CDS
Gene -
Product DUF3313 domain-containing protein
Location 400150 - 400848 (strand: 1)
Length 699 (nucleotides) / 232 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4130
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF11769 Protein of unknown function (DUF3313)

Protein Sequence

MHRAAKNTVTKSTITKNTVTKSIITAAALFLLAACSSRLPDTTEQSGFLSDYQRLNEEDTVSGNKIKAWTSTEFSTDKPETKLIFTPVSFRPLNKNNQMGKQFMAVLLNYTNQQIKRELAKHYTLTETTAPGVLHFSGVITSVSLTNKEMKPYEVLPVMLIIAGTQLVVGNRDADTNLFFEWKITDSVTKTAHLEAIRKNNGVQLSNKQQQITLEDLKEAVDIIAAEILPAA

Flanking regions ( +/- flanking 50bp)

TGTTAGCATCCCGGTAACTTTTTAAAAATCATAAAGATACCGAGAGTAATATGCATCGCGCAGCAAAGAATACCGTTACAAAAAGTACAATCACAAAGAATACAGTCACAAAATCCATCATAACAGCGGCAGCACTCTTTCTGTTGGCGGCATGTTCAAGCCGTTTGCCGGATACGACGGAGCAATCAGGTTTTCTTAGTGACTATCAGCGTTTGAATGAAGAAGATACGGTGTCCGGCAATAAAATAAAGGCATGGACATCAACTGAGTTCAGTACAGACAAGCCGGAAACAAAACTTATTTTTACCCCGGTTTCTTTCAGACCGCTGAATAAAAATAATCAGATGGGCAAACAGTTTATGGCGGTGTTGCTCAACTACACTAATCAGCAGATCAAACGGGAACTGGCGAAACATTATACATTGACGGAAACTACCGCTCCCGGAGTGCTGCATTTCAGCGGGGTGATTACCTCGGTTAGTCTGACAAATAAAGAGATGAAGCCGTATGAAGTGCTGCCGGTAATGCTGATTATTGCCGGAACGCAGCTTGTGGTCGGTAACCGGGATGCGGATACCAATCTCTTTTTTGAATGGAAAATTACAGATTCAGTCACGAAAACAGCTCATCTTGAGGCGATCAGGAAGAATAACGGGGTTCAGCTGAGTAACAAACAGCAACAGATAACCCTGGAAGATTTAAAAGAGGCAGTGGATATCATTGCGGCAGAGATCCTGCCTGCCGCATAGTATTCACACCGGCGGCTGATATTACCGGCCGCCCGTTTCCATAATCAGAC