Homologs in group_2615

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03670 FBDBKF_03670 79.4 Morganella morganii S1 - Tir chaperone protein (CesT) family protein
EHELCC_06865 EHELCC_06865 79.4 Morganella morganii S2 - Tir chaperone protein (CesT) family protein
NLDBIP_07190 NLDBIP_07190 79.4 Morganella morganii S4 - Tir chaperone protein (CesT) family protein
LHKJJB_06725 LHKJJB_06725 79.4 Morganella morganii S3 - Tir chaperone protein (CesT) family protein
HKOGLL_04205 HKOGLL_04205 79.4 Morganella morganii S5 - Tir chaperone protein (CesT) family protein

Distribution of the homologs in the orthogroup group_2615

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2615

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11200
Feature type CDS
Gene -
Product type III secretion system chaperone
Location 379650 - 380045 (strand: 1)
Length 396 (nucleotides) / 131 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2615
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF05932 Tir chaperone protein (CesT) family

Protein Sequence

MPDLVSFHRIAMMLLRHIGLDAPPPAADQHTFMLTIDERYSLSLTIIDASDWYISANVGELPHITQSDELMRNIMKLNALTQLAGQPVISLNEKEEWVIWSRLPLSGTEDSQVIELFEYLLKSADYLLDLH

Flanking regions ( +/- flanking 50bp)

TTGATTGTTTGTCATAATATCGGCATTATCTGAACAATAAAGGAATCGACATGCCGGATTTAGTATCATTTCACCGTATTGCCATGATGCTGCTGCGCCATATTGGTCTGGACGCTCCGCCACCGGCGGCAGATCAACATACTTTTATGTTAACCATTGATGAACGCTATTCTCTGTCCCTTACCATCATTGATGCATCAGACTGGTATATCTCAGCGAATGTAGGTGAGTTACCACACATTACACAAAGTGATGAATTGATGCGGAATATCATGAAGCTGAATGCATTAACGCAGCTTGCCGGGCAGCCGGTTATTTCACTTAATGAAAAAGAAGAGTGGGTTATCTGGAGCCGTTTGCCGCTGAGCGGAACGGAAGACAGCCAGGTAATTGAGTTATTCGAGTATTTATTAAAATCAGCAGATTATCTGTTGGATCTCCATTAATCATAAAAGGAATTATGATGCCTAATATTCATCAGCAATTATCTGTGCAT