Homologs in group_2948

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15560 FBDBKF_15560 77.9 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_15920 EHELCC_15920 77.9 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_16450 NLDBIP_16450 77.9 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_16355 LHKJJB_16355 77.9 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
HKOGLL_16125 HKOGLL_16125 77.9 Morganella morganii S5 potE Serine transporter YbeC, amino acid:H+ symporter family

Distribution of the homologs in the orthogroup group_2948

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2948

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77400 8e-131 386 52 2 420 1 ybaT Inner membrane transport protein YbaT Escherichia coli (strain K12)
Q58026 1.98e-43 160 30 5 382 1 MJ0609 Uncharacterized protein MJ0609 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O64759 2.94e-15 81 24 8 373 1 CAT5 Cationic amino acid transporter 5 Arabidopsis thaliana
Q9ASS7 1.52e-14 79 25 10 378 1 CAT2 Cationic amino acid transporter 2, vacuolar Arabidopsis thaliana
Q9C5D6 1.86e-14 79 25 10 392 2 CAT9 Cationic amino acid transporter 9, chloroplastic Arabidopsis thaliana
Q797A7 3.24e-13 74 25 9 368 3 mtrA Methylthioribose transporter Bacillus subtilis (strain 168)
Q84MA5 8.52e-13 73 24 9 370 1 CAT1 Cationic amino acid transporter 1 Arabidopsis thaliana
Q8GYB4 9.57e-13 73 24 10 376 2 CAT3 Cationic amino acid transporter 3, mitochondrial Arabidopsis thaliana
O34739 1.52e-11 69 22 7 381 1 steT Serine/threonine exchanger SteT Bacillus subtilis (strain 168)
Q8W4K3 2.76e-11 68 22 9 331 1 CAT4 Cationic amino acid transporter 4, vacuolar Arabidopsis thaliana
Q9WTR6 2.79e-10 65 25 11 368 1 Slc7a11 Cystine/glutamate transporter Mus musculus
O43246 1.17e-09 63 26 11 340 1 SLC7A4 Cationic amino acid transporter 4 Homo sapiens
P63350 2.01e-09 62 27 9 327 3 BQ2027_MB2022C Uncharacterized transporter Mb2022c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WQM3 2.01e-09 62 27 9 327 1 Rv1999c Uncharacterized transporter Rv1999c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQM2 2.01e-09 62 27 9 327 3 MT2055 Uncharacterized transporter MT2055 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q9QXA6 2.82e-09 62 22 12 411 1 Slc7a9 b(0,+)-type amino acid transporter 1 Mus musculus
A2RHI9 4.33e-09 62 24 15 404 1 bcaP Branched-chain amino acid permease BcaP Lactococcus lactis subsp. cremoris (strain MG1363)
Q9SHH0 5e-09 62 21 9 375 2 CAT8 Cationic amino acid transporter 8, vacuolar Arabidopsis thaliana
Q8BLQ7 6.16e-09 61 24 9 332 1 Slc7a4 Cationic amino acid transporter 4 Mus musculus
B3TP03 1.27e-08 60 21 9 396 2 SLC7A2 Cationic amino acid transporter 2 Gallus gallus
Q6DCE8 1.37e-08 60 23 13 408 2 slc7a2 Cationic amino acid transporter 2 Xenopus laevis
O08812 1.64e-08 60 20 8 396 1 Slc7a3 Cationic amino acid transporter 3 Rattus norvegicus
Q8WY07 5.13e-08 58 21 11 396 1 SLC7A3 Cationic amino acid transporter 3 Homo sapiens
Q9Z1K8 6.71e-08 58 22 14 427 1 Slc7a7 Y+L amino acid transporter 1 Mus musculus
Q9LZ20 7.43e-08 58 20 6 276 2 CAT6 Cationic amino acid transporter 6, chloroplastic Arabidopsis thaliana
P82251 7.74e-08 58 23 11 313 1 SLC7A9 b(0,+)-type amino acid transporter 1 Homo sapiens
Q9R0S5 1.1e-07 57 22 14 427 1 Slc7a7 Y+L amino acid transporter 1 Rattus norvegicus
Q9N1R6 1.76e-07 57 21 13 414 2 SLC7A9 b(0,+)-type amino acid transporter 1 Oryctolagus cuniculus
P40812 1.88e-07 57 22 11 407 3 ansP L-asparagine permease Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A2RI97 1.97e-07 56 22 12 334 3 hisP Histidine permease HisP Lactococcus lactis subsp. cremoris (strain MG1363)
P82252 2.8e-07 56 23 9 312 1 Slc7a9 b(0,+)-type amino acid transporter 1 Rattus norvegicus
Q5RAG7 3.38e-07 55 29 8 200 2 SLC7A11 Cystine/glutamate transporter Pongo abelii
Q9UPY5 3.41e-07 55 29 8 200 1 SLC7A11 Cystine/glutamate transporter Homo sapiens
P37460 4.04e-07 55 22 17 466 3 proY Proline-specific permease ProY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P70423 4.91e-07 55 20 8 396 1 Slc7a3 Cationic amino acid transporter 3 Mus musculus
O07576 6.95e-07 55 25 12 425 1 bcaP Branched-chain amino acid permease BcaP Bacillus subtilis (strain 168)
Q92536 8.14e-07 54 22 16 433 1 SLC7A6 Y+L amino acid transporter 2 Homo sapiens
B5D5N9 8.61e-07 55 20 8 395 1 Slc7a2 Cationic amino acid transporter 2 Rattus norvegicus
Q28I80 8.95e-07 54 23 9 256 2 slc7a6 Y+L amino acid transporter 2 Xenopus tropicalis
Q59I64 1.02e-06 54 24 20 436 2 slc7a6 Y+L amino acid transporter 2 Danio rerio
A8I499 1.87e-06 53 20 8 399 2 SLC7A2 Cationic amino acid transporter 2 Sus scrofa
Q09143 2.46e-06 53 20 10 395 1 Slc7a1 High affinity cationic amino acid transporter 1 Mus musculus
A1L3M3 2.46e-06 53 24 10 254 2 slc7a6 Y+L amino acid transporter 2 Xenopus laevis
D3ZMM8 5.75e-06 52 23 16 436 1 Slc7a6 Y+L amino acid transporter 2 Rattus norvegicus
P63116 5.79e-06 52 24 16 357 1 Slc7a10 Asc-type amino acid transporter 1 Rattus norvegicus
P63115 5.79e-06 52 24 16 357 1 Slc7a10 Asc-type amino acid transporter 1 Mus musculus
Q9UM01 6.25e-06 52 22 16 444 1 SLC7A7 Y+L amino acid transporter 1 Homo sapiens
Q8BGK6 6.85e-06 52 23 16 436 1 Slc7a6 Y+L amino acid transporter 2 Mus musculus
P30825 7.76e-06 52 21 11 410 1 SLC7A1 High affinity cationic amino acid transporter 1 Homo sapiens
P39277 8.25e-06 51 21 4 239 1 yjeH L-methionine/branched-chain amino acid exporter YjeH Escherichia coli (strain K12)
P18581 1.03e-05 51 20 8 395 1 Slc7a2 Cationic amino acid transporter 2 Mus musculus
P52569 1.12e-05 51 19 9 398 1 SLC7A2 Cationic amino acid transporter 2 Homo sapiens
O34560 3.35e-05 49 22 9 374 3 yecA Uncharacterized amino acid permease YecA Bacillus subtilis (strain 168)
P0AAE2 3.4e-05 49 24 17 374 1 proY Proline-specific permease ProY Escherichia coli (strain K12)
P0AAE3 3.4e-05 49 24 17 374 3 proY Proline-specific permease ProY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAE4 3.4e-05 49 24 17 374 3 proY Proline-specific permease ProY Escherichia coli O157:H7
Q7VEQ4 4.04e-05 49 22 12 333 3 ansP1 L-asparagine permease 1 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P30823 6e-05 48 20 10 402 2 Slc7a1 High affinity cationic amino acid transporter 1 Rattus norvegicus
A2RNZ6 0.000115 48 22 15 379 1 lysP Lysine-specific permease LysP Lactococcus lactis subsp. cremoris (strain MG1363)
Q5PR34 0.000125 48 20 9 358 2 slc7a2 Cationic amino acid transporter 2 Danio rerio
Q9QXW9 0.000137 47 21 14 437 1 Slc7a8 Large neutral amino acids transporter small subunit 2 Mus musculus
Q7TZ67 0.000144 47 25 13 340 3 BQ2027_MB2001C Uncharacterized transporter Mb2001c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P45539 0.000145 47 23 8 386 2 frlA Probable fructoselysine/psicoselysine transporter FrlA Escherichia coli (strain K12)
Q9WVR6 0.000165 47 21 14 437 1 Slc7a8 Large neutral amino acids transporter small subunit 2 Rattus norvegicus
Q9SQZ0 0.000186 47 19 4 228 3 CAT7 Cationic amino acid transporter 7, chloroplastic Arabidopsis thaliana
P9WQM5 0.000217 47 25 12 339 1 Rv1979c Uncharacterized transporter Rv1979c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQM4 0.000217 47 25 12 339 3 MT2031 Uncharacterized transporter MT2031 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8X845 0.000219 47 23 8 386 3 frlA Probable fructoselysine/psicoselysine transporter FrlA Escherichia coli O157:H7
Q22397 0.000356 46 23 15 342 1 aat-6 Amino acid transporter protein 6 Caenorhabditis elegans
B0UYF2 0.000429 46 21 11 340 3 slc7a14a Probable cationic amino acid transporter Danio rerio
Q9N1Q4 0.000533 45 20 13 435 1 SLC7A8 Large neutral amino acids transporter small subunit 2 Oryctolagus cuniculus
Q5RAE3 0.000704 45 21 14 437 2 SLC7A8 Large neutral amino acids transporter small subunit 2 Pongo abelii
Q9UHI5 0.000704 45 21 14 437 1 SLC7A8 Large neutral amino acids transporter small subunit 2 Homo sapiens
Q9LHN7 0.000717 45 24 6 207 2 At3g13620 Probable polyamine transporter At3g13620 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10860
Feature type CDS
Gene -
Product APC family permease
Location 308212 - 309489 (strand: 1)
Length 1278 (nucleotides) / 425 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2948
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF13520 Amino acid permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0531 Amino acid transport and metabolism (E) E Serine transporter YbeC, amino acid:H+ symporter family

Protein Sequence

MKSVSSEKSLTLLQVVALGIGAMVGAGIFALLGQTALIMQSATWLAFSCGGVIALFAGYAYARLTARYPSQGGIIDFFRLSLPSALTIALSLLYLVTLILTIAMVARAFGAYAVQLFHQGSGHPLLPEMYTAFVIIAVGLLNIVSSHAVGKIEVLLVGIKLTIIIVLIITGLITMDTSKLEIHTFSGDALFSAVGLTFFAYAGFGMMANASDKVAEPERVMPKAFMIAILFTIVLYISLSLVLLGNLSPAVLARYADTAVAQVAYPIFGQTGFTIVAIGALLATASAINATCFSAFNITDSMSHSGLLPRSWGKVMCGQGTRSNILMILITLVFALTLNLSDLANVASFTFLLCYLMVLVVAWRLSRIIRASKVIIGLGIIVILAVLAGFVVTLFSQGIIAVSIIAGALIVCLAIGCQRRRSLAE

Flanking regions ( +/- flanking 50bp)

TTTTTATGTTCACCCGTAATCGCGGCTATATGCCGGACAGGTATCTTCCCATGAAATCTGTGTCATCTGAAAAATCGTTAACATTATTGCAGGTAGTTGCATTAGGAATAGGGGCAATGGTCGGGGCGGGGATCTTTGCCCTGCTGGGGCAAACTGCGCTTATCATGCAATCCGCGACATGGCTGGCATTTTCCTGCGGGGGCGTTATTGCCTTGTTCGCCGGGTATGCTTATGCCAGGCTGACCGCCCGTTATCCCTCGCAAGGCGGGATCATTGATTTCTTCCGTTTATCATTACCCTCCGCCCTGACTATCGCGCTCTCATTATTGTATCTGGTGACGCTTATCCTGACGATAGCAATGGTTGCGCGGGCGTTTGGCGCATATGCGGTTCAGCTTTTTCATCAGGGGAGCGGGCATCCTCTGCTACCGGAGATGTATACGGCTTTTGTCATTATTGCTGTCGGGTTGCTCAATATTGTCAGCAGTCATGCGGTTGGCAAAATTGAAGTGCTGCTGGTGGGGATTAAGCTGACTATCATTATAGTGCTGATAATCACGGGGCTGATTACGATGGATACCAGCAAACTGGAAATACATACGTTTTCCGGTGATGCGCTGTTTTCTGCTGTCGGACTGACCTTTTTTGCCTATGCGGGATTTGGCATGATGGCGAATGCCTCAGACAAAGTGGCAGAGCCAGAACGGGTGATGCCGAAAGCCTTTATGATAGCTATTCTATTTACCATTGTGCTCTATATCAGTTTGTCTCTGGTGCTACTCGGTAATTTGTCTCCCGCCGTTTTGGCCCGCTATGCAGACACTGCGGTGGCGCAGGTGGCTTACCCGATTTTCGGGCAGACCGGATTTACCATTGTGGCAATCGGTGCGTTGCTGGCAACAGCTTCTGCGATTAATGCGACCTGTTTTTCCGCGTTTAATATCACGGACAGCATGAGTCATTCGGGATTACTGCCCCGCTCCTGGGGGAAAGTGATGTGCGGGCAGGGGACCCGCAGTAATATCCTGATGATTCTGATTACACTGGTATTCGCGCTGACGCTCAATCTCAGTGACCTGGCGAATGTTGCCAGTTTTACCTTTCTTCTATGTTATCTGATGGTTCTGGTGGTTGCATGGCGGCTCAGCCGGATTATCCGTGCCTCAAAAGTCATTATTGGCTTGGGTATCATTGTGATCCTGGCGGTATTAGCGGGGTTTGTGGTGACATTGTTTAGCCAGGGAATTATTGCTGTCAGTATTATTGCTGGCGCACTGATTGTCTGTCTGGCGATTGGCTGTCAGCGGCGGCGGAGTCTGGCTGAGTAACCGGATCCCTCTGCAAACAAGGCAATAAAAAACCCCCGGAACCAGTCCGG