Homologs in group_1453

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09235 FBDBKF_09235 88.6 Morganella morganii S1 - Outer membrane cobalamin translocator
EHELCC_10175 EHELCC_10175 88.6 Morganella morganii S2 - Outer membrane cobalamin translocator
NLDBIP_10520 NLDBIP_10520 88.6 Morganella morganii S4 - Outer membrane cobalamin translocator
LHKJJB_10835 LHKJJB_10835 88.6 Morganella morganii S3 - Outer membrane cobalamin translocator
HKOGLL_13895 HKOGLL_13895 88.6 Morganella morganii S5 - Outer membrane cobalamin translocator
PMI_RS13205 PMI_RS13205 67.0 Proteus mirabilis HI4320 - TonB-dependent receptor

Distribution of the homologs in the orthogroup group_1453

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1453

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6LLU3 2.13e-12 73 21 24 671 3 btuB Vitamin B12 transporter BtuB Photobacterium profundum (strain SS9)
Q7MQ42 1.46e-09 64 26 5 168 3 btuB Vitamin B12 transporter BtuB Vibrio vulnificus (strain YJ016)
C3LPZ6 3.93e-09 63 20 19 637 3 btuB Vitamin B12 transporter BtuB Vibrio cholerae serotype O1 (strain M66-2)
Q9KVI9 3.93e-09 63 20 19 637 3 btuB Vitamin B12 transporter BtuB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F4P6 3.93e-09 63 20 19 637 3 btuB Vitamin B12 transporter BtuB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
A5F9G0 3.17e-08 60 21 18 633 3 irgA Iron-regulated outer membrane virulence protein Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6R0 3.2e-08 60 21 18 633 3 irgA Iron-regulated outer membrane virulence protein Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A7MXY8 5.02e-07 56 27 5 157 3 btuB Vitamin B12 transporter BtuB Vibrio campbellii (strain ATCC BAA-1116)
P76115 1.07e-06 55 27 8 161 1 pqqU Pyrroloquinoline quinone transporter Escherichia coli (strain K12)
Q8DD41 1.13e-06 55 26 7 187 3 btuB Vitamin B12 transporter BtuB Vibrio vulnificus (strain CMCP6)
P37409 6.32e-06 53 25 3 148 3 btuB Vitamin B12 transporter BtuB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z314 6.43e-06 53 25 3 148 3 btuB Vitamin B12 transporter BtuB Salmonella typhi
Q7MYE3 6.51e-06 53 28 6 163 3 btuB Vitamin B12 transporter BtuB Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q32AE6 6.94e-06 52 24 3 148 3 btuB Vitamin B12 transporter BtuB Shigella dysenteriae serotype 1 (strain Sd197)
Q5PK67 7.06e-06 52 25 3 148 3 btuB Vitamin B12 transporter BtuB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57H87 7.06e-06 52 25 3 148 3 btuB Vitamin B12 transporter BtuB Salmonella choleraesuis (strain SC-B67)
P13036 9.72e-06 52 20 22 645 1 fecA Fe(3+) dicitrate transport protein FecA Escherichia coli (strain K12)
Q83IS4 1.81e-05 51 24 3 148 3 btuB Vitamin B12 transporter BtuB Shigella flexneri
Q0SY25 1.95e-05 51 24 3 148 3 btuB Vitamin B12 transporter BtuB Shigella flexneri serotype 5b (strain 8401)
Q1R3U1 2.88e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Escherichia coli (strain UTI89 / UPEC)
A1AIE8 2.88e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Escherichia coli O1:K1 / APEC
A8A774 2.9e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Escherichia coli O9:H4 (strain HS)
A7ZUI6 2.9e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Escherichia coli O139:H28 (strain E24377A / ETEC)
Q3YV10 2.92e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Shigella sonnei (strain Ss046)
P06129 2.92e-05 50 23 3 148 1 btuB Vitamin B12 transporter BtuB Escherichia coli (strain K12)
Q8CVJ0 2.95e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TA90 2.98e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q93SE0 3.27e-05 50 25 7 197 3 btuB Vitamin B12 transporter BtuB Escherichia coli
O52903 4.19e-05 50 26 6 157 3 btuB Vitamin B12 transporter BtuB Citrobacter freundii
Q8X714 4.86e-05 50 23 3 148 3 btuB Vitamin B12 transporter BtuB Escherichia coli O157:H7
A4WG45 0.000117 48 24 3 153 3 btuB Vitamin B12 transporter BtuB Enterobacter sp. (strain 638)
P17315 0.000218 48 28 2 118 1 cirA Colicin I receptor Escherichia coli (strain K12)
Q66G57 0.000262 47 27 2 105 3 btuB Vitamin B12 transporter BtuB Yersinia pseudotuberculosis serotype I (strain IP32953)
A7FD14 0.000262 47 27 2 105 3 btuB Vitamin B12 transporter BtuB Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4TRG0 0.000483 47 27 2 116 3 btuB Vitamin B12 transporter BtuB Yersinia pestis (strain Pestoides F)
Q1CNP0 0.000483 47 27 2 116 3 btuB Vitamin B12 transporter BtuB Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZAA1 0.000483 47 27 2 116 3 btuB Vitamin B12 transporter BtuB Yersinia pestis
Q1CBU1 0.000483 47 27 2 116 3 btuB Vitamin B12 transporter BtuB Yersinia pestis bv. Antiqua (strain Antiqua)
A7ML93 0.00066 46 26 2 108 3 btuB Vitamin B12 transporter BtuB Cronobacter sakazakii (strain ATCC BAA-894)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10735
Feature type CDS
Gene -
Product TonB-dependent receptor
Location 277380 - 279308 (strand: -1)
Length 1929 (nucleotides) / 642 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1453
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00593 TonB dependent receptor-like, beta-barrel
PF07715 TonB-dependent Receptor Plug Domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4771 Inorganic ion transport and metabolism (P) P Outer membrane receptor for ferrienterochelin and colicins

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02014 iron complex outermembrane recepter protein - -

Protein Sequence

MKRTLLSCAILLATAPAVHAESADILTVWGSPLASNPDVITQSQMKSLNKTNAATAISTMPGVVLEKSGNRNELTVKVRGFDSRQVPVFFDGIPTYVPYDGNLDLGRFMTSELESIEVSKGYTSLLQGPNLMGGAINLTTATPKKPFEANVSYSQGFARGADNAYNTSARVGARSDLGFIQVSGSQYKQRFLGLPASDDDNALAGSNGRRAHSSSDDKRGMVKVGWTPRDTDQYVVTYMKQEGEKDSPPSAGTGKGKYSYWEWPDYNKESYYFNGTTQITDGINLQSRLYHDKFVNTLLMYPKKGNKVDYSHYDDFSNGASLQLGIDMRERDLLSFSGHRKDDVHRAQKERNGEILRYKDRTYSVATEYQWAATSDLDIIGAIGYDWRDSLDADKGAGDNSQNAFNWEVMSKYTFANQDNVRFSVSDRSRFPTQKERYTTEKPKDGSKGIINPDLNPERALTFDLTYEGSITDKWGYQASIYHNRVDDAILAHTVVKNGQDFFQNQNSGRVDYTGLDLGVKGDITDWLKTGVNYSYIHSDPKDVDHVEGLPTHKMYAWLKVNPIDPLTLTLAEEFRAWSYQYNDSNEKVAGFATTDLRMDYDFGHGMSANASVNNLFDKSYYFTNGYMEEGRNFWLGVEFRY

Flanking regions ( +/- flanking 50bp)

TTATATAAAATAATACATATCGATAATTCGGTTACAGGAAAAACAATAAAATGAAACGAACGCTACTCAGCTGCGCCATACTGCTGGCGACGGCACCCGCTGTTCACGCGGAAAGTGCCGATATTCTGACAGTATGGGGCAGTCCGCTGGCTTCAAACCCGGATGTCATTACACAATCTCAGATGAAATCCCTGAACAAAACTAATGCCGCCACCGCAATCAGCACTATGCCGGGTGTGGTACTTGAAAAATCAGGCAACCGCAATGAACTGACGGTGAAAGTCCGGGGTTTTGACAGCCGCCAAGTGCCTGTTTTCTTTGACGGGATACCGACTTATGTACCGTATGACGGCAATCTCGATCTCGGCCGCTTTATGACCAGCGAACTGGAAAGCATTGAAGTGAGTAAAGGCTACACCTCGCTGTTACAGGGTCCGAACCTGATGGGGGGCGCTATCAACCTCACCACCGCCACACCGAAAAAACCGTTTGAAGCCAATGTGTCCTACAGCCAGGGGTTTGCCCGTGGCGCGGATAATGCGTACAACACCAGCGCCCGTGTCGGCGCGCGCAGCGACCTTGGTTTTATTCAGGTCAGCGGCAGTCAGTATAAACAACGTTTCCTGGGTCTGCCCGCGTCTGATGATGATAATGCCCTGGCTGGCAGTAACGGACGCCGCGCACACTCTTCTTCTGATGATAAACGCGGCATGGTAAAGGTGGGCTGGACACCGCGCGACACTGATCAGTATGTTGTGACCTATATGAAACAGGAGGGTGAGAAAGACAGCCCGCCGTCAGCCGGAACAGGTAAAGGCAAATATTCATACTGGGAATGGCCGGATTATAATAAAGAGAGTTACTATTTTAACGGCACCACACAGATTACTGACGGCATAAATCTCCAGAGCCGCCTGTATCACGATAAATTTGTGAATACCCTGCTGATGTACCCGAAAAAAGGCAATAAAGTCGATTACAGTCACTATGATGATTTCAGTAACGGCGCCTCTCTCCAGTTAGGAATAGATATGCGCGAGCGCGATCTGCTTTCTTTTTCCGGTCACCGGAAAGATGATGTTCACCGCGCACAAAAAGAACGCAACGGGGAAATCCTGCGTTACAAAGACCGCACCTATTCTGTGGCAACAGAGTACCAGTGGGCAGCAACATCCGATCTCGATATTATCGGTGCCATCGGCTATGACTGGCGTGACAGCCTTGATGCGGATAAAGGTGCAGGCGATAACAGCCAGAATGCATTCAACTGGGAAGTGATGTCAAAATACACCTTTGCCAATCAGGATAATGTCCGTTTCTCCGTTTCTGACCGCAGCCGTTTCCCGACACAGAAAGAGCGTTATACCACTGAAAAACCGAAAGATGGTTCAAAAGGGATTATTAATCCGGATCTTAACCCTGAGCGCGCACTGACCTTTGATTTAACCTATGAAGGCAGCATTACCGACAAGTGGGGCTACCAGGCCAGTATTTATCATAACCGTGTGGATGATGCGATCCTCGCCCACACTGTCGTGAAAAATGGTCAGGATTTCTTTCAGAACCAGAACAGCGGTCGCGTGGATTACACCGGGCTGGATCTGGGTGTGAAAGGTGACATCACTGATTGGCTGAAAACCGGCGTCAATTACAGCTACATTCACAGCGATCCGAAAGATGTTGATCATGTGGAAGGTCTGCCGACACACAAAATGTATGCCTGGCTGAAAGTGAACCCGATCGATCCGCTGACTCTCACCCTGGCAGAAGAGTTCCGTGCATGGAGCTATCAGTACAATGACAGCAACGAAAAAGTTGCGGGCTTTGCCACCACGGATCTGCGGATGGATTATGACTTCGGACACGGCATGTCTGCCAATGCATCGGTAAATAATCTGTTTGATAAATCCTATTACTTTACCAATGGCTATATGGAAGAAGGCCGTAATTTCTGGCTGGGTGTTGAATTCCGCTATTAATAATTGATTTTATACCCTTATTCATTCAAACCGCAGGTTCGTTGGCTGCA