Homologs in group_2806

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09325 FBDBKF_09325 53.1 Morganella morganii S1 - Prephenate dehydrogenase
EHELCC_10085 EHELCC_10085 53.1 Morganella morganii S2 - Prephenate dehydrogenase
NLDBIP_10430 NLDBIP_10430 53.1 Morganella morganii S4 - Prephenate dehydrogenase
LHKJJB_10925 LHKJJB_10925 53.1 Morganella morganii S3 - Prephenate dehydrogenase
HKOGLL_13985 HKOGLL_13985 53.1 Morganella morganii S5 - Prephenate dehydrogenase

Distribution of the homologs in the orthogroup group_2806

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2806

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10640
Feature type CDS
Gene -
Product hypothetical protein
Location 258728 - 259114 (strand: 1)
Length 387 (nucleotides) / 128 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2806
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22513 type III secretion system protein - -

Protein Sequence

MRCKALQREVRQLIAHFSLKERYAEIALAQLNQRYREEQENHRSLLQLISALEQQILSFDITGMYTYLELNELRRKQSVYRRQILDIRVKAEESALAQVQIMDDINKTNTVIVVLKKKVIKITQYSLH

Flanking regions ( +/- flanking 50bp)

TTTTTTGTGTCAGCCACCGGCAAAATCAGTGCCTTTGAGTGAGGTCTGTAATGCGCTGCAAAGCCTTACAGCGTGAGGTCAGACAGCTGATTGCACATTTCAGTCTGAAAGAGCGCTATGCTGAGATTGCACTGGCACAACTGAACCAGCGCTACAGAGAGGAGCAGGAAAATCACCGTAGTTTGTTACAGCTAATCAGCGCACTTGAGCAGCAGATCCTCAGTTTTGATATAACAGGGATGTACACTTACCTGGAACTGAATGAGCTACGGCGTAAACAGTCAGTTTATCGCAGGCAAATTCTGGATATCAGAGTCAAAGCAGAGGAATCAGCCCTGGCTCAGGTTCAAATCATGGATGATATCAATAAAACTAATACGGTTATTGTCGTACTCAAAAAGAAAGTCATCAAAATCACTCAGTATAGTCTTCATTGATACCATTATTAAACATTGATTATCAGGAAGTAATACAGCAAAGGAGAACC