Homologs in group_3108

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19635 FBDBKF_19635 94.4 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_16925 EHELCC_16925 94.4 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
NLDBIP_17525 NLDBIP_17525 94.4 Morganella morganii S4 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_17445 LHKJJB_17445 94.4 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_17260 HKOGLL_17260 94.4 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family

Distribution of the homologs in the orthogroup group_3108

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3108

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52689 6.98e-112 329 51 0 295 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
Q8XBK9 5.85e-44 155 32 3 298 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
P45463 1.07e-43 154 32 3 298 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
Q0TD46 5.23e-43 152 31 3 298 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P43011 6.21e-43 152 28 1 278 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q1R6S1 5.4e-42 150 31 3 298 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 5.4e-42 150 31 3 298 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P30864 4.05e-40 145 32 3 293 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
Q9JPU9 1.07e-39 144 31 3 293 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P76250 3.69e-39 142 28 2 299 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
Q9JXW7 5.41e-38 139 30 3 293 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P67662 2.8e-37 137 30 2 299 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 2.8e-37 137 30 2 299 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 2.8e-37 137 30 2 299 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P75836 5.32e-32 123 27 5 290 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P37641 2.11e-31 122 28 2 296 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
A0A0H2ZDG9 3.67e-29 116 28 2 296 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
P72131 2.42e-27 111 28 3 294 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q01610 6.95e-27 110 28 6 297 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P77333 1.97e-26 108 24 3 294 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P37459 1.97e-20 92 24 6 298 3 sinR Probable HTH-type transcriptional regulator SinR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57083 6.31e-16 79 25 11 298 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P55576 6.83e-16 79 25 6 295 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P37682 1.52e-15 79 22 10 307 3 yiaU Uncharacterized HTH-type transcriptional regulator YiaU Escherichia coli (strain K12)
A5F9F9 1.36e-14 76 23 5 293 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6D1 1.65e-14 75 23 5 293 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q4G384 4.22e-14 74 26 10 294 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P52686 3.57e-13 72 31 1 148 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
P96725 2.11e-12 69 23 9 289 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P0A9F6 2.5e-12 69 25 5 266 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 2.5e-12 69 25 5 266 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 2.5e-12 69 25 5 266 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P46068 2.75e-12 69 22 5 298 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P45099 1.74e-11 67 27 2 187 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52669 6.88e-11 65 28 1 136 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P37499 1.13e-10 64 22 8 303 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P0ACR8 1.14e-10 64 29 2 151 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 1.14e-10 64 29 2 151 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
Q57748 1.3e-10 64 28 13 258 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q55459 5.57e-10 62 29 1 129 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P20668 6.98e-10 62 29 2 144 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P52658 7.51e-10 62 25 7 279 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P45461 8.8e-10 62 25 10 309 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
Q85G62 1.34e-09 61 27 0 124 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P33634 1.52e-09 61 23 9 269 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
Q08597 1.55e-09 61 28 3 163 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P52660 4.66e-09 60 24 11 287 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
O32255 5.26e-09 59 30 3 124 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
Q44311 6.28e-09 59 22 3 191 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
Q47005 6.36e-09 59 27 2 163 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
P77700 6.84e-09 59 33 0 92 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P52696 8.6e-09 59 25 9 254 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P42507 9.54e-09 58 25 2 170 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P39592 1.25e-08 58 20 4 247 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
Q04778 2.24e-08 57 26 0 123 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P70785 2.68e-08 57 22 5 249 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P0ACR4 2.79e-08 57 26 2 141 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 2.79e-08 57 26 2 141 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 2.79e-08 57 26 2 141 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
Q8X4M5 2.99e-08 57 26 2 137 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P96194 4.49e-08 54 38 1 88 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P27111 4.58e-08 57 26 2 140 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P14145 6.39e-08 56 25 1 142 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
P07774 8.28e-08 56 30 2 123 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P0DUU5 9.66e-08 55 42 0 69 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
A4QH19 9.91e-08 55 32 0 116 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
Q6B936 1.03e-07 55 26 4 160 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
O35038 1.04e-07 55 24 2 143 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
Q1XDT2 1.3e-07 55 26 2 153 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P76369 1.49e-07 55 21 6 276 3 yeeY Uncharacterized HTH-type transcriptional regulator YeeY Escherichia coli (strain K12)
A0T0V5 1.55e-07 55 22 2 153 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P51205 1.56e-07 55 26 2 153 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
A2CI69 1.6e-07 55 26 3 150 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
P52670 2.74e-07 54 29 0 116 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
A0R8S0 2.9e-07 54 22 3 148 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q9X5P2 3.96e-07 54 26 1 133 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
P52595 4.31e-07 53 28 2 148 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
Q5N5I5 4.32e-07 54 25 3 152 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 4.32e-07 54 25 3 152 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52685 5.82e-07 53 26 1 141 3 mauR Mau operon transcriptional activator Paracoccus denitrificans
Q6HPH4 6.85e-07 53 23 3 140 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
P48271 7.85e-07 53 25 2 150 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P52667 7.99e-07 53 28 0 122 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q81IX0 8.31e-07 53 23 3 140 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81VJ1 8.78e-07 53 23 3 140 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
Q63H01 9.03e-07 53 23 3 140 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 9.03e-07 53 23 3 140 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
P52676 9.34e-07 53 24 4 178 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
Q00678 1.01e-06 52 22 4 244 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
P16931 1.03e-06 52 28 3 138 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
P52666 1.08e-06 52 28 8 197 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
P35112 1.12e-06 52 22 4 244 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
P52683 1.17e-06 52 20 8 283 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
O19892 1.25e-06 52 22 6 242 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P52691 1.31e-06 52 30 0 120 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P73123 1.61e-06 52 26 2 153 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q3MCB5 2.64e-06 52 26 0 122 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q8YQ82 2.77e-06 51 26 0 122 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P05827 2.88e-06 51 25 1 155 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P0A2Q2 3.1e-06 51 25 1 155 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 3.1e-06 51 25 1 155 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P0ACQ9 3.2e-06 51 23 1 142 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 3.2e-06 51 23 1 142 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 3.2e-06 51 23 1 142 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
O69055 3.41e-06 50 28 6 173 3 ptxE Putative HTH-type transcriptional regulator protein PtxE (Fragment) Stutzerimonas stutzeri
P44821 3.77e-06 51 23 4 182 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O78432 5.05e-06 50 24 0 124 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
O87883 7.49e-06 49 32 0 94 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
P94501 8.97e-06 50 23 3 190 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
O68014 9.17e-06 50 24 1 122 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P24734 1.28e-05 49 23 6 278 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9I6Z9 1.29e-05 49 38 0 67 3 bauR HTH-type transcriptional activator BauR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52665 1.32e-05 47 31 4 119 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q06610 1.47e-05 49 21 11 300 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P05051 1.57e-05 49 22 6 296 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
O06703 2.02e-05 48 26 2 165 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P12529 2.39e-05 48 24 2 143 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P56885 3.11e-05 48 28 3 150 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)
O32186 3.56e-05 48 26 2 123 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
Q765S2 4.16e-05 47 21 8 257 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
Q1RF30 4.77e-05 47 23 8 277 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 4.77e-05 47 23 8 277 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P39647 6.71e-05 47 25 2 120 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P77309 6.87e-05 47 27 2 125 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
A0T0G2 0.000104 47 20 1 143 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
P94387 0.000112 47 23 0 123 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P52677 0.000177 46 38 0 65 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
P67668 0.000237 45 38 0 68 3 BQ2027_MB2303C Uncharacterized HTH-type transcriptional regulator Mb2303c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMF3 0.000237 45 38 0 68 1 Rv2282c Uncharacterized HTH-type transcriptional regulator Rv2282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF2 0.000237 45 38 0 68 3 MT2340 Uncharacterized HTH-type transcriptional regulator MT2340 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8FK66 0.000271 45 23 8 277 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 0.000271 45 23 8 277 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P52678 0.000291 45 26 1 126 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P52693 0.000305 45 25 3 143 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
O87324 0.000378 45 25 4 181 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
P42427 0.000439 44 24 2 125 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q57S50 0.000541 44 24 9 270 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
P25547 0.000558 44 26 5 161 3 gbpR HTH-type transcriptional regulator GbpR Rhizobium radiobacter
B4E8S9 0.000615 44 26 1 110 1 ssuR HTH-type transcriptional regulator SsuR Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
P25544 0.000765 44 24 1 127 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P55181 0.000787 43 22 0 120 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
O33812 0.000834 43 21 5 211 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P03030 0.001 43 22 4 188 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10430
Feature type CDS
Gene -
Product LysR family transcriptional regulator
Location 198414 - 199331 (strand: 1)
Length 918 (nucleotides) / 305 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3108
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MITSETLALLEEMAVFAKVVETGSFSEAARQLGATPSAVSRSVSRLERALNTRLLQRTTRKLRLNESGKAVYQHCQALVNSAGAVMNASGQFSETPSGLVRLGAPKALGYFMVHPLINEFLNANPGVNVMLRLEDRYMDLIDEEIDLAIRITNEPPPGLIGKRLFAVSHILCATPQYLAEHGVPSHPQELKNHSCLFLSEEAADTRWRFQQGNKVVSVNVHGRYASNHSGVRLDGVKSHLGIGGLPVFTARKSLERGEVVQVLADWTFKTRYSGDAWLLYPPSRYQPPHMMVFIDYLVQKLREIG

Flanking regions ( +/- flanking 50bp)

CAGACTCTGTAATATGATAATACGGCAAAAATGCAAAGGATTTATTCCCTGTGATCACAAGTGAAACCCTCGCATTACTCGAAGAAATGGCAGTGTTTGCCAAGGTGGTTGAAACCGGCAGCTTTTCTGAAGCCGCCCGGCAACTGGGTGCAACCCCTTCTGCTGTCAGCCGCTCGGTTTCCCGTCTTGAGCGCGCGCTCAATACCCGCCTGTTGCAGCGCACAACCCGGAAATTGCGTCTGAATGAAAGTGGTAAAGCGGTTTATCAGCATTGTCAGGCGCTGGTGAATTCGGCGGGGGCGGTGATGAATGCCAGCGGGCAGTTCAGTGAAACGCCCTCGGGGCTGGTGCGTCTGGGTGCGCCGAAAGCTCTGGGGTATTTTATGGTGCATCCGCTTATCAATGAATTCCTTAATGCCAATCCCGGGGTGAATGTCATGTTGCGCCTGGAAGATCGCTATATGGATTTGATTGATGAAGAGATTGATCTTGCTATCCGTATCACGAATGAGCCGCCGCCGGGGCTTATCGGCAAGCGGCTTTTTGCGGTCAGCCATATCCTGTGCGCCACACCGCAATATCTTGCTGAGCACGGCGTGCCATCTCACCCGCAGGAGCTGAAAAACCACAGTTGTTTATTTCTGAGCGAAGAGGCAGCTGATACGCGCTGGCGTTTTCAGCAGGGAAATAAAGTGGTGTCTGTGAATGTACACGGGCGTTATGCGTCTAATCACAGTGGCGTGCGGCTCGATGGTGTGAAATCACATCTTGGTATCGGCGGGCTGCCGGTGTTTACTGCCCGTAAATCACTGGAGAGGGGTGAGGTGGTTCAGGTACTGGCTGACTGGACATTCAAAACACGTTACAGCGGGGATGCCTGGCTGCTTTATCCGCCGTCGCGTTATCAGCCGCCGCATATGATGGTATTTATTGATTATCTGGTACAGAAATTGCGGGAAATTGGGTGAAGTATGAGTCATATAAATATGAATAAGGGTATAAATTGCAGACATAAAAA