Homologs in group_3038

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18130 FBDBKF_18130 68.3 Morganella morganii S1 mrfJ MrfJ
EHELCC_16830 EHELCC_16830 68.3 Morganella morganii S2 mrfJ MrfJ
NLDBIP_17620 NLDBIP_17620 68.3 Morganella morganii S4 mrfJ MrfJ
LHKJJB_17540 LHKJJB_17540 68.3 Morganella morganii S3 mrfJ MrfJ
HKOGLL_17355 HKOGLL_17355 68.3 Morganella morganii S5 mrfJ MrfJ

Distribution of the homologs in the orthogroup group_3038

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3038

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10335
Feature type CDS
Gene -
Product MrfJ
Location 178467 - 179330 (strand: -1)
Length 864 (nucleotides) / 287 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3038
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MKNIIRYLSVLTVLFLFTLSSAHAEIYSYITRSEGKPKNIDYYYTIAAWSPPARGEPNPCFQAGLSKTCYANINHRHTNANKGGVASRNDSNFNSRCQGNLVNLRDARDVYDYIYNNCFGGLPYSSNTNHVGDPIRNECVTLFLTSKSNAGGGYMFPGAICGVSPPPGGICSFDVGNPNIFLDHGRIQDDMIKGNVASEYLTVKCSKDTVVRVYSISDTESRLQLKQNLYSRLTLNNYPLNASQGGVQMYVRGDYPTEAELKSTLETTGTVAPGAFSGMISIIMTID

Flanking regions ( +/- flanking 50bp)

TGCATTTAATGCCACCGCATTCCTGACTATCGACTACTTCTGAGGCCGGTATGAAAAATATTATCCGTTATCTGAGTGTACTGACTGTGCTTTTTTTATTCACCCTTTCCTCCGCACACGCAGAAATTTACAGCTATATCACCCGCTCGGAAGGGAAACCTAAAAATATTGATTACTACTATACCATTGCAGCCTGGAGCCCTCCTGCACGCGGAGAACCAAACCCGTGCTTTCAGGCCGGGCTTTCTAAAACCTGCTATGCCAATATTAATCACCGTCACACTAATGCCAATAAGGGCGGAGTAGCGTCACGTAACGACAGTAATTTTAACAGCCGCTGCCAGGGAAACTTAGTGAATCTTCGGGATGCGCGTGATGTCTATGACTATATTTATAATAACTGCTTTGGCGGATTGCCTTACTCAAGCAATACAAACCATGTCGGCGATCCTATCCGCAATGAGTGTGTCACCCTTTTTCTGACCTCTAAATCAAATGCAGGCGGAGGCTATATGTTTCCCGGTGCTATTTGTGGTGTATCCCCCCCACCCGGCGGAATATGCAGTTTTGATGTCGGTAACCCGAACATCTTTTTAGATCACGGGCGGATTCAGGACGATATGATTAAGGGCAATGTCGCCTCGGAATACCTGACCGTAAAATGCAGTAAAGATACGGTTGTACGGGTGTATTCCATTTCCGACACAGAAAGTCGTCTGCAACTCAAACAAAACCTGTATAGCCGGCTGACACTGAATAACTACCCACTGAACGCATCACAGGGAGGCGTGCAGATGTATGTCAGAGGTGACTACCCGACAGAGGCTGAACTGAAAAGTACACTGGAAACAACCGGAACTGTCGCCCCGGGGGCATTCAGTGGCATGATTTCCATTATTATGACTATCGACTGATATTCCTTTATACGCCGGCAGCACCCTCTGCCGGCGCTTTTCCTCCCGTC