Homologs in group_4118

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4118

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4118

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P14633 0.0 594 71 1 399 1 ecoRIIR Type II restriction enzyme EcoRII Escherichia coli
P34880 0.000707 45 26 4 127 4 ssoIIR Type II restriction enzyme SsoII Shigella sonnei

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10165
Feature type CDS
Gene -
Product type II restriction endonuclease
Location 144468 - 145667 (strand: -1)
Length 1200 (nucleotides) / 399 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4118
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF09019 EcoRII C terminal
PF09217 Restriction endonuclease EcoRII, N-terminal

Protein Sequence

MSGFQNWLIDKSVGNYFLYIKRLSANDTGATGGHQVGLYIPSGIVTELFPSINHTREQNPSVLLRACYFSHSCADTEARAIYYNNSFFGKTRNEKRITRWGPKSPLQDPENTGALAILAFGHTPGNDSNHVDVWVCNNPDEEDIIEAAIGEIIPGTLLFGPGKEILGGLALQPKITKKSYKIPDVWKTEFPSGTEIIQYAAGYFSAHCSDPDEQLLDRRRVEYDIFLLIEEMHVLDIIRKGFGSVDEFIAMANSVSNRRKSRAGRSLELHLEQLFLEHGLTHFATQCVTEGNKKPDFIFPSAEAYHDVAFPDNNLHMLAVKTTCKDRWRQVLNEADRIKNIHLFTLQEGVSPAQFREMQQAGVTLVVPSALHKKYPEAVRTELMTLGSFIAKLTGIYAA

Flanking regions ( +/- flanking 50bp)

TAATTTATGAAACAATAGAGCCTGAGACCATTATCATTGAGGAAAAAGCTGTGTCAGGATTTCAAAACTGGTTAATCGATAAGTCAGTTGGCAATTATTTCCTTTACATCAAACGCCTCTCAGCAAACGATACGGGAGCTACCGGAGGGCATCAGGTAGGGCTTTATATCCCTTCAGGCATTGTTACTGAGCTTTTCCCTTCTATCAATCATACCAGAGAACAAAATCCTTCCGTCTTGCTTCGTGCCTGTTATTTCTCACATTCCTGTGCAGATACTGAAGCCCGTGCGATTTATTACAATAATAGCTTTTTTGGTAAAACCAGGAATGAAAAACGCATTACGCGTTGGGGGCCAAAGAGTCCACTTCAGGACCCTGAAAACACAGGAGCACTGGCAATATTAGCTTTCGGGCATACGCCTGGTAATGACAGCAATCATGTAGATGTATGGGTTTGCAACAACCCGGATGAAGAAGATATTATCGAAGCTGCCATTGGTGAAATTATTCCCGGCACGCTCTTATTCGGTCCGGGTAAAGAAATACTTGGAGGATTAGCACTTCAACCAAAAATAACAAAGAAAAGTTATAAAATTCCGGATGTATGGAAAACAGAATTTCCATCAGGAACTGAAATAATACAATACGCTGCCGGATATTTTTCAGCTCATTGTTCAGACCCCGATGAACAACTACTTGATCGGAGGCGCGTAGAGTACGATATTTTTCTCTTGATAGAAGAAATGCATGTACTCGACATAATCCGTAAAGGTTTCGGGTCCGTTGATGAGTTTATAGCAATGGCTAATTCTGTCAGTAACAGACGAAAATCGAGAGCTGGCCGGTCGCTGGAGCTGCATCTTGAACAACTTTTCCTTGAGCATGGTTTAACTCATTTTGCGACTCAATGTGTAACTGAAGGCAACAAAAAACCTGATTTTATATTCCCTTCTGCCGAAGCGTATCACGATGTAGCATTTCCGGATAATAACCTCCATATGCTTGCAGTAAAAACAACATGCAAAGATCGCTGGCGGCAAGTTTTAAATGAAGCAGACAGAATAAAAAACATCCATCTTTTTACTCTCCAGGAAGGAGTATCACCGGCGCAGTTCAGAGAGATGCAACAAGCAGGTGTAACCTTGGTCGTTCCTTCTGCTTTGCATAAAAAGTACCCCGAAGCAGTTCGTACCGAATTAATGACATTAGGTAGCTTTATTGCCAAACTCACTGGGATCTATGCTGCTTAATAGCATATAGAATAATCTCCGGCATATTAAACCGGAGATTAATGTTATTA