Homologs in group_1376

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08510 FBDBKF_08510 66.5 Morganella morganii S1 oapA Cell division protein YtfB/OapA (opacity-associated protein A)
EHELCC_13015 EHELCC_13015 66.5 Morganella morganii S2 oapA Cell division protein YtfB/OapA (opacity-associated protein A)
NLDBIP_13355 NLDBIP_13355 66.5 Morganella morganii S4 oapA Cell division protein YtfB/OapA (opacity-associated protein A)
LHKJJB_13200 LHKJJB_13200 66.5 Morganella morganii S3 oapA Cell division protein YtfB/OapA (opacity-associated protein A)
HKOGLL_11830 HKOGLL_11830 66.5 Morganella morganii S5 oapA Cell division protein YtfB/OapA (opacity-associated protein A)
PMI_RS16810 PMI_RS16810 40.9 Proteus mirabilis HI4320 - LysM-like peptidoglycan-binding domain-containing protein

Distribution of the homologs in the orthogroup group_1376

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1376

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39310 1.7e-18 82 34 7 204 3 ytfB Cell division protein YtfB Escherichia coli (strain K12)
P44415 1.05e-06 51 31 1 92 2 oapA Opacity-associated protein OapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09735
Feature type CDS
Gene -
Product LysM-like peptidoglycan-binding domain-containing protein
Location 48838 - 49437 (strand: -1)
Length 600 (nucleotides) / 199 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1376
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04225 Opacity-associated protein A LysM-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3061 Cell cycle control, cell division, chromosome partitioning (D) D Cell division protein YtfB/OapA (opacity-associated protein A)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07269 cell division protein YtfB - -

Protein Sequence

MRLLPKFHLYTIAAIALIVIIVLFLWPSAPKPPVTSPPQTIGLTPPVQDDPLGDLMAQRQLTDTQGTTENTLPQDDNLPPVAQAQDPVPQLPAELPPVITETAPVVTAAQDAPLVAQRFTVKKGQTIAQVFRNNGLPVDDLFRMTAVEGAQKPLNQVEAGDKIRVIRGKDKAITELTIDKTSGQSVTFKRQKDGSYRRS

Flanking regions ( +/- flanking 50bp)

TGAAAGAACGTCTGATGATTATAACGCATGCACAATAGCGGGGAAATACTATGCGGTTACTGCCCAAATTCCATCTTTATACCATCGCCGCCATCGCGCTGATTGTTATTATTGTGCTGTTTTTATGGCCATCCGCACCCAAACCGCCGGTGACATCTCCGCCACAGACTATCGGTCTGACACCACCGGTACAGGATGATCCGCTGGGTGACCTGATGGCACAGCGTCAGCTTACCGACACACAGGGCACAACAGAAAATACCCTGCCACAGGATGATAACCTGCCGCCTGTTGCTCAGGCTCAGGATCCGGTACCACAACTCCCGGCAGAACTGCCACCGGTCATCACAGAAACAGCACCTGTCGTTACAGCTGCACAGGATGCTCCGCTTGTAGCGCAGCGGTTTACGGTAAAAAAAGGACAGACAATCGCGCAGGTTTTCCGTAATAACGGGTTACCGGTTGATGATTTATTCCGGATGACCGCCGTTGAAGGGGCGCAAAAGCCGCTGAACCAGGTTGAGGCAGGAGATAAAATACGGGTTATCCGGGGGAAAGACAAAGCGATTACAGAGCTGACAATTGATAAGACCAGCGGACAGTCCGTGACCTTTAAACGCCAGAAAGACGGCAGTTACCGCCGTTCATGATGTAAAAGCCTTTATGATGTAAAACATAAAAAAAACGCTGGCCTGAGCCA