Homologs in group_4104

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4104

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4104

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09410
Feature type CDS
Gene -
Product fimbrial protein
Location 1984249 - 1985271 (strand: 1)
Length 1023 (nucleotides) / 340 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4104
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF00419 Fimbrial protein

Protein Sequence

MKLKLLVVLAAMGMAKFSLAACILGTDTPNYVKETLTVTQVGGPIELSSMEPVNPLAPFATLYSSTTSKHAQYSCLLPAGEKVSRVRPITNGSLVLYGPANPPIYKTKVPGIGVRFQYGAGRDLPEPFDYYNTLPNKDGNILVNYGPATMAAMFYKMGKIELDKVPASYQETVLLLGSMHVGHGQIMDITFLDYAIGDVFLVSTPVCSVDKPINIDYGIVTEEQTKIGFSKPLNFGMTCHSDYGAYKAIASIRSDDMSNDSKSIRVTDSNNNKDSLMIEIKDASNNLVKVDGSVKLESAPALSGQRAEYKWNAVLKRRGGSPAPAKGNFNASAIITLDIM

Flanking regions ( +/- flanking 50bp)

TTATTCCCTGCTGACATGCTTGCTATTTTAGATATTAACAAGGAAATGTAATGAAACTAAAATTACTCGTGGTATTAGCGGCAATGGGAATGGCGAAATTCAGCCTGGCTGCATGTATCCTTGGTACGGATACGCCTAATTACGTGAAGGAAACCCTGACAGTCACTCAGGTTGGTGGTCCTATTGAATTATCATCCATGGAACCTGTAAATCCACTAGCTCCGTTTGCAACGTTATACTCAAGCACGACCTCCAAACATGCGCAATATTCATGCCTCCTTCCGGCCGGTGAAAAAGTATCACGGGTAAGACCAATAACAAACGGCAGCCTTGTACTCTATGGTCCTGCAAATCCGCCTATTTATAAAACAAAAGTCCCGGGTATTGGTGTCCGTTTTCAGTACGGAGCGGGTCGTGACCTTCCTGAACCATTCGATTACTACAATACCCTGCCAAATAAGGACGGTAACATTCTTGTTAACTATGGACCCGCCACTATGGCGGCGATGTTCTATAAAATGGGAAAAATTGAACTGGATAAAGTGCCGGCCTCCTATCAGGAAACAGTGCTTTTACTTGGCAGCATGCATGTCGGTCATGGCCAGATTATGGATATAACTTTTCTGGATTATGCAATCGGGGATGTATTCCTGGTTAGTACACCCGTTTGTTCCGTAGATAAACCTATTAATATTGATTACGGCATTGTCACTGAAGAACAAACAAAAATAGGTTTTAGCAAACCACTTAATTTTGGTATGACCTGTCATTCTGACTACGGTGCTTATAAAGCAATCGCCTCTATCCGTTCTGACGATATGAGTAATGACAGTAAAAGCATTCGTGTTACTGACTCAAATAATAATAAAGATTCTCTTATGATTGAGATAAAAGATGCAAGTAATAACCTGGTAAAAGTTGATGGTTCCGTAAAGTTAGAATCCGCTCCGGCTCTTTCCGGTCAGCGTGCTGAATATAAATGGAACGCAGTATTAAAGCGCAGAGGTGGTTCTCCTGCTCCTGCAAAAGGTAACTTTAACGCCAGTGCAATCATTACTCTTGATATTATGTAGAGTGAAAATATTATGAATAATACAATATTTGTCAGTATCGCCAGTTACAG