Homologs in group_4101

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4101

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4101

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9I746 1.19e-38 139 32 8 258 1 tagJ Type VI secretion system accessory component TagJ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09315
Feature type CDS
Gene -
Product type VI secretion system accessory protein TagJ
Location 1956035 - 1956865 (strand: -1)
Length 831 (nucleotides) / 276 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4101
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF07024 ImpE protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4455 General function prediction only (R) R Protein of avirulence locus involved in temperature-dependent protein secretion

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11898 type VI secretion system protein ImpE - -

Protein Sequence

MATTQKLSDILSGSSLDEFFEDTLNKVKQQPSDLVFRETLFKLYCLKGYWEKAMVQLETWSLIDGHNDDKQLELYKNLVFSEILREEILKGKREPMTLQQELPEWMKSIWEANKLLIENKLDKSEALRLQAFENAPAVGGSGETIGDFAWMADNDSRLGPICEFIVAGGYRWVPFADIETINIVKPRDLLDLIWIHAQVKVKSDIFYGYIPARYPVRDTDSDKIKLGFETQWDQISEYFLTGKGGKMVITDMGEYPLSELNKVSMVMVNTETENVG

Flanking regions ( +/- flanking 50bp)

CTATAAATTAGGCTTAGATAGCCGTTTATAATTAATTAAGGATTTTGATAATGGCCACAACGCAAAAACTCTCTGATATTCTCTCTGGTTCATCACTGGATGAATTTTTTGAAGATACGCTTAATAAAGTAAAACAACAGCCGAGTGACTTAGTTTTTCGTGAAACACTGTTTAAACTCTATTGCCTGAAAGGCTATTGGGAAAAGGCGATGGTTCAGCTGGAAACATGGTCATTAATTGATGGTCATAATGATGATAAGCAGCTTGAGCTGTATAAAAATTTAGTATTCAGTGAAATTTTACGTGAAGAGATCCTGAAAGGAAAGCGTGAGCCAATGACGCTGCAGCAGGAATTACCGGAGTGGATGAAATCTATCTGGGAAGCGAATAAATTACTGATTGAAAATAAATTAGATAAATCAGAAGCACTGCGTTTGCAGGCATTTGAAAATGCCCCTGCTGTTGGCGGTAGTGGTGAAACGATTGGTGATTTTGCCTGGATGGCAGATAACGACAGCCGTTTAGGGCCGATTTGCGAATTTATTGTTGCCGGTGGCTATCGCTGGGTTCCGTTTGCAGATATTGAAACTATCAATATTGTAAAACCCCGTGATTTACTGGATCTTATTTGGATTCATGCTCAGGTTAAAGTCAAAAGCGATATTTTTTATGGCTATATCCCGGCTCGCTATCCTGTACGTGATACAGACAGTGATAAAATCAAATTGGGTTTTGAAACTCAGTGGGATCAGATCTCTGAATATTTCCTGACAGGTAAAGGCGGGAAAATGGTTATCACTGATATGGGTGAATATCCGTTATCTGAGCTAAATAAAGTTTCTATGGTAATGGTAAATACTGAAACCGAAAATGTTGGATAATAAAAAACAATATCTGCCTGCATTGCTTGATCGGTTGATCGATGAACATC