Homologs in group_2658

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04610 FBDBKF_04610 65.2 Morganella morganii S1 - Topoisomerase IV
EHELCC_05900 EHELCC_05900 65.2 Morganella morganii S2 - Topoisomerase IV
NLDBIP_06220 NLDBIP_06220 65.2 Morganella morganii S4 - Topoisomerase IV
LHKJJB_03100 LHKJJB_03100 65.2 Morganella morganii S3 - Topoisomerase IV
HKOGLL_06575 HKOGLL_06575 65.2 Morganella morganii S5 - Topoisomerase IV

Distribution of the homologs in the orthogroup group_2658

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2658

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09060
Feature type CDS
Gene -
Product hypothetical protein
Location 1895244 - 1896023 (strand: -1)
Length 780 (nucleotides) / 259 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2658
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MGKLIKLVLMLIVAAAFTGAGYYMGTPETKPPVLREALSSSSAEKSPVIVEKKMMAESFLFLESLRKISPEKYKEIKREMGDYDSMTDEQKLAWVNKITGLTAILLIDRVPYASDEALNAFAVAIKEQADGYLIKDPSGQLCFNNFFPALNKFPQDKLAVSYNEADIRMLKTVNLILTSSLENRNSHSVSEHDAYRVLGSVSQKLSEKYGDQVNLLSNPEEGAKDPVMTCRIVGDFYELFTQEPDKAATAEALRQILSD

Flanking regions ( +/- flanking 50bp)

TTGAATGACGTTGGGTATATATGTTGCCGGTAATAAATGCAGAGGAAAGTATGGGTAAATTAATAAAACTGGTGTTGATGCTGATTGTCGCTGCTGCGTTTACAGGAGCCGGTTATTATATGGGAACACCGGAAACAAAGCCGCCGGTTTTACGGGAGGCGCTCAGCAGCAGCAGCGCGGAGAAATCGCCTGTTATTGTTGAAAAAAAGATGATGGCGGAATCATTTCTGTTTCTTGAGTCACTGCGTAAAATCTCACCTGAAAAATATAAAGAAATAAAACGCGAGATGGGTGATTACGATTCAATGACCGATGAGCAGAAACTGGCATGGGTGAATAAAATCACCGGGCTGACGGCGATATTATTAATCGATCGTGTTCCTTATGCTTCTGACGAGGCGTTAAACGCCTTTGCTGTGGCGATTAAAGAGCAGGCAGACGGATATCTGATAAAAGATCCGTCCGGGCAACTGTGTTTTAATAATTTTTTTCCGGCACTGAATAAATTCCCGCAGGATAAATTGGCTGTTTCTTATAATGAAGCCGATATCCGGATGTTGAAAACGGTTAATCTGATCCTGACGTCATCTCTGGAAAACCGAAATAGTCATTCAGTGTCTGAGCACGATGCCTATCGCGTATTAGGCTCCGTTTCACAGAAACTGAGTGAGAAATACGGCGATCAGGTTAATTTGTTATCAAACCCTGAAGAGGGTGCAAAAGACCCGGTAATGACCTGTCGTATTGTCGGGGATTTTTATGAATTATTTACTCAGGAGCCGGATAAAGCCGCTACCGCAGAGGCATTGCGACAGATCTTGTCTGATTGATTTTCATGCTGTCACCGTAAATCAACCATCGGTATTGAGTTTATCCGGTG