Homologs in group_885

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04550 FBDBKF_04550 89.7 Morganella morganii S1 mgtE Mg/Co/Ni transporter MgtE (contains CBS domain)
EHELCC_05840 EHELCC_05840 89.7 Morganella morganii S2 mgtE Mg/Co/Ni transporter MgtE (contains CBS domain)
NLDBIP_06160 NLDBIP_06160 89.7 Morganella morganii S4 mgtE Mg/Co/Ni transporter MgtE (contains CBS domain)
LHKJJB_03040 LHKJJB_03040 89.7 Morganella morganii S3 mgtE Mg/Co/Ni transporter MgtE (contains CBS domain)
HKOGLL_06515 HKOGLL_06515 89.7 Morganella morganii S5 mgtE Mg/Co/Ni transporter MgtE (contains CBS domain)
PMI_RS10390 PMI_RS10390 72.4 Proteus mirabilis HI4320 mgtE magnesium transporter

Distribution of the homologs in the orthogroup group_885

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_885

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q5SMG8 4.56e-52 181 33 2 324 1 mgtE Magnesium transporter MgtE Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q830V1 4.02e-35 136 28 2 321 1 mgtE Magnesium transporter MgtE Enterococcus faecalis (strain ATCC 700802 / V583)
O34442 4.76e-28 116 28 4 316 1 mgtE Magnesium transporter MgtE Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09005
Feature type CDS
Gene -
Product magnesium transporter
Location 1879742 - 1880764 (strand: -1)
Length 1023 (nucleotides) / 340 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_885
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00571 CBS domain
PF01769 Divalent cation transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2239 Inorganic ion transport and metabolism (P) P Mg/Co/Ni transporter MgtE (contains CBS domain)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06213 magnesium transporter - -

Protein Sequence

MTTPSVNPPHQTERQTHTDEDAVSAYMSQAYIRVAVSDTIAQVKHVLREELEGEQIPTYLYVLDEDNYLNGILPVKALLTSGEELFVAEVMRQNYFFVSPEQTRHDVYELINNSGIDTVPVVQFGKLTGILRPQDIAELIEDENTQDAALQGGSQPLDEPYLSTSPVTLWRKRAVWLLMLFVAEAYTGTVLKAFEDQLEAAISLAFFIPLLIGTGGNSGTQITSTLVRAMALGEVGLRNIGAVLRKELTTSLMVAFTMGCAGMIRAWFLGVGPEIMIVVSLTLVCITVWSAVVSSIIPMVLQRLKVDPAVVSAPFIATLIDGTGLIIYFEIARHVMTDLV

Flanking regions ( +/- flanking 50bp)

GGTCACACATCATGAAATTAACTCACTACGAAAAAGCGGATACGCTGGTCATGACCACGCCATCCGTCAATCCGCCACATCAAACCGAACGTCAGACCCACACCGATGAAGACGCCGTCAGCGCTTACATGAGCCAGGCCTACATCCGCGTGGCAGTATCTGACACTATCGCACAGGTAAAGCACGTTCTGCGTGAAGAGCTTGAAGGCGAGCAAATCCCCACCTATTTATATGTATTGGATGAGGATAATTACCTGAATGGCATTCTGCCGGTGAAAGCATTGCTGACATCCGGGGAAGAGCTGTTTGTCGCGGAGGTGATGCGTCAGAATTACTTCTTCGTTTCACCGGAACAGACACGCCATGACGTGTATGAGCTGATTAACAACAGCGGGATTGATACTGTGCCGGTGGTACAGTTCGGTAAATTGACCGGTATTCTGCGCCCGCAGGATATCGCGGAACTGATTGAGGATGAGAATACGCAGGATGCGGCATTGCAGGGGGGCTCACAGCCTCTGGATGAGCCGTATCTGAGCACCAGTCCGGTCACACTGTGGCGCAAGCGTGCAGTCTGGCTGTTGATGCTGTTTGTGGCAGAAGCGTACACGGGGACGGTTCTCAAGGCATTTGAGGATCAACTGGAAGCGGCTATTTCACTGGCATTCTTTATTCCGTTACTGATAGGTACCGGTGGTAACAGTGGTACACAGATAACCTCAACACTGGTGCGTGCAATGGCGCTTGGTGAAGTGGGGCTGAGAAATATCGGTGCGGTACTGCGCAAAGAGCTGACCACCTCACTGATGGTGGCATTCACCATGGGCTGTGCCGGGATGATCCGCGCCTGGTTCCTTGGCGTTGGTCCGGAAATTATGATAGTGGTCAGTCTGACACTGGTCTGTATTACTGTCTGGAGTGCGGTGGTTTCATCCATCATTCCGATGGTGCTTCAGCGCCTGAAAGTTGACCCTGCGGTGGTTTCCGCGCCATTTATTGCCACACTTATTGACGGCACCGGGCTGATTATCTATTTTGAAATCGCCAGACACGTTATGACGGATCTGGTGTAACACCGGCGGTATCAGCAACAAGCACACTTTTACAATGACGGCACAGGTAT