Homologs in group_833

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04195 FBDBKF_04195 88.4 Morganella morganii S1 yggE oxidative stress defense protein
EHELCC_05485 EHELCC_05485 88.4 Morganella morganii S2 yggE oxidative stress defense protein
NLDBIP_05805 NLDBIP_05805 88.4 Morganella morganii S4 yggE oxidative stress defense protein
LHKJJB_02685 LHKJJB_02685 88.4 Morganella morganii S3 yggE oxidative stress defense protein
HKOGLL_06160 HKOGLL_06160 88.4 Morganella morganii S5 yggE oxidative stress defense protein
PMI_RS10040 PMI_RS10040 57.7 Proteus mirabilis HI4320 - oxidative stress defense protein

Distribution of the homologs in the orthogroup group_833

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_833

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O52400 2.09e-76 234 52 5 246 4 yggE Uncharacterized protein YggE Edwardsiella ictaluri (strain 93-146)
P0ADS8 1.69e-70 219 53 6 243 4 yggE Uncharacterized protein YggE Shigella flexneri
P0ADS6 1.69e-70 219 53 6 243 4 yggE Uncharacterized protein YggE Escherichia coli (strain K12)
P0ADS7 1.69e-70 219 53 6 243 4 yggE Uncharacterized protein YggE Escherichia coli O157:H7
P0A3U9 5.7e-26 104 30 5 243 3 bp26 26 kDa periplasmic immunogenic protein Brucella suis biovar 1 (strain 1330)
P0A3U8 5.7e-26 104 30 5 243 3 bp26 26 kDa periplasmic immunogenic protein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q44642 4.37e-25 102 29 5 243 1 bp26 26 kDa periplasmic immunogenic protein Brucella abortus (strain S19)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08640
Feature type CDS
Gene -
Product oxidative stress defense protein
Location 1783966 - 1784694 (strand: -1)
Length 729 (nucleotides) / 242 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_833
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04402 Protein of unknown function (DUF541)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2968 Function unknown (S) S Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09807 uncharacterized protein - -

Protein Sequence

MKLKSLALAAMVALGSYSVAAQAAETPAGPHISTSGSAVIQAEPDMATLSINVTVKDSGAAGAKAQADKRVAQYFDFLKAQGIEKKDINAANINTSPDYVYDKEKEESVIRGYNASRSVTVKVYDLNKLNTLLDGALKSGLDDIRSVEFGVNNPEKYRADARQKAIDDAVSQAKSVAKGFGSELGAVYSIGYNAPQPVPVMARGKMMMNMDAAPAGATADETYEQQTVDFRDQVDVVFELKR

Flanking regions ( +/- flanking 50bp)

TCCGGCATAACGTTCTGTTATGTGACCGGATCTTAACAGAAGGAGGATATGTGAAACTTAAATCTCTTGCCCTTGCCGCCATGGTTGCTTTAGGGAGTTATTCGGTTGCTGCGCAGGCAGCGGAAACCCCGGCTGGTCCGCATATCTCAACTTCCGGTAGTGCGGTCATTCAGGCTGAGCCTGATATGGCGACACTGTCTATCAATGTGACAGTGAAGGATAGCGGGGCAGCGGGTGCCAAAGCACAGGCAGATAAACGCGTTGCACAGTATTTTGATTTCCTGAAAGCGCAGGGAATTGAGAAAAAAGACATCAATGCGGCAAATATTAATACCAGCCCTGACTATGTCTATGATAAAGAAAAAGAAGAGTCGGTTATCCGTGGTTACAATGCGTCCCGCTCTGTGACGGTAAAAGTGTACGACCTTAATAAGTTAAACACATTGCTGGATGGCGCACTGAAGAGTGGTCTGGATGATATTCGCTCTGTGGAATTCGGGGTGAATAATCCGGAAAAATATCGCGCGGATGCACGTCAGAAAGCCATTGATGATGCGGTATCACAGGCAAAATCCGTCGCAAAAGGTTTCGGCTCTGAGCTGGGTGCCGTGTACAGTATCGGTTATAACGCACCACAGCCGGTTCCGGTTATGGCACGCGGTAAAATGATGATGAACATGGACGCGGCACCTGCGGGTGCAACGGCCGATGAAACCTATGAACAGCAGACCGTTGATTTCCGTGATCAGGTGGATGTTGTGTTTGAACTGAAACGTTAATCTGTTTCGGGCGGCGCCTGCCGCAATGTCTGACGCCCGTGTTTGATCAG